[Obo-phenotype-commits] obo/ontology/phenotype/phenotype_xp human_phenotype_xp.obo, 1.314, 1.315

[Georgios V. G. <gk...@us...>]

Update of /cvsroot/obo/obo/ontology/phenotype/phenotype_xp
In directory sfp-cvsdas-1.v30.ch3.sourceforge.com:/tmp/cvs-serv6739

Modified Files:
	human_phenotype_xp.obo 
Log Message:
update

Index: human_phenotype_xp.obo
===================================================================
RCS file: /cvsroot/obo/obo/ontology/phenotype/phenotype_xp/human_phenotype_xp.obo,v
retrieving revision 1.314
retrieving revision 1.315
diff -C2 -d -r1.314 -r1.315
*** human_phenotype_xp.obo	25 Feb 2010 18:27:37 -0000	1.314
--- human_phenotype_xp.obo	26 Feb 2010 08:12:20 -0000	1.315
***************
*** 377,381 ****
  
  [Term]
! id: HP:0010655 ! Absence of the third cerebral ventricle
  intersection_of: PATO:0001557 ! lacking physical part
  intersection_of: towards FMA:78454 ! third ventricle
--- 377,381 ----
  
  [Term]
! id: HP:0010661 ! Absence of the third cerebral ventricle
  intersection_of: PATO:0001557 ! lacking physical part
  intersection_of: towards FMA:78454 ! third ventricle
***************
*** 387,391 ****
  
  [Term]
! id: HP:0010658 ! Fusion of the left and right thalami
  intersection_of: PATO:0002034 ! undivided
  intersection_of: inheres_in FMA:62007 ! Thalamus
--- 387,391 ----
  
  [Term]
! id: HP:0010664 ! Fusion of the left and right thalami
  intersection_of: PATO:0002034 ! undivided
  intersection_of: inheres_in FMA:62007 ! Thalamus
***************
*** 494,503 ****
  intersection_of: qualifier PATO:0000460 ! abnormal
  
! ! this should be a named term in HPO
! ![Term]
! !id: _:bilateral_coxa_valga
! !is_anonymous: true
! !intersection_of: HP:0002673 ! Coxa valga
! !intersection_of: qualifier PATO:0000618 ! bilateral
  
  [Term]
--- 494,502 ----
  intersection_of: qualifier PATO:0000460 ! abnormal
  
! 
! [Term]
! id: HP:0010665 ! bilateral_coxa_valga
! intersection_of: HP:0002673 ! Coxa valga
! intersection_of: qualifier PATO:0000618 ! bilateral
  
  [Term]
***************
*** 896,901 ****
  
  [Term]
! id: _:hypoplastic_anterior_nasal_spine
! is_anonymous: true
  intersection_of: PATO:0000645 ! hypoplastic
  intersection_of: inheres_in FMA:75770 ! Anterior nasal spine of maxilla
--- 895,899 ----
  
  [Term]
! id: HP:0010666 ! Hypoplasia of the anterior nasal spine
  intersection_of: PATO:0000645 ! hypoplastic
  intersection_of: inheres_in FMA:75770 ! Anterior nasal spine of maxilla
***************
*** 2287,2304 ****
  
  [Term]
! id: HP:0010661 ! Aplasia of the maxilla
  intersection_of: PATO:0001483 ! aplastic
  intersection_of: inheres_in FMA:9711 ! maxilla
  
  [Term]
! id: HP:0010663 ! Hypoplasia of the zygomatic bone
  intersection_of: PATO:0000645 ! hypoplastic
  intersection_of: inheres_in FMA:52747 ! Zygomatic bone
  
- ! Peter/Sandra Malar hypoplasia is defined in HPO as midface hypoplasia but is it just the Zygomatic bone
  [Term]
  id: HP:0000272 ! Malar hypoplasia
  intersection_of: PATO:0000645 ! hypoplastic
! intersection_of: inheres_in FMA:52747 ! Zygomatic bone
  
  [Term]
--- 2285,2301 ----
  
  [Term]
! id: HP:0010667 ! Aplasia of the maxilla
  intersection_of: PATO:0001483 ! aplastic
  intersection_of: inheres_in FMA:9711 ! maxilla
  
  [Term]
! id: HP:0010669 ! Hypoplasia of the zygomatic bone
  intersection_of: PATO:0000645 ! hypoplastic
  intersection_of: inheres_in FMA:52747 ! Zygomatic bone
  
  [Term]
  id: HP:0000272 ! Malar hypoplasia
  intersection_of: PATO:0000645 ! hypoplastic
! intersection_of: inheres_in FMA:53120 ! Zygoma
  
  [Term]
***************
*** 2306,2310 ****
  intersection_of: PATO:0000001 ! quality
  intersection_of: has_part HP:0000327 ! Maxillary hypoplasia
! intersection_of: has_part HP:0010663 ! Hypoplasia of the zygomatic bone
  
  [Term]
--- 2303,2307 ----
  intersection_of: PATO:0000001 ! quality
  intersection_of: has_part HP:0000327 ! Maxillary hypoplasia
! intersection_of: has_part HP:0010669 ! Hypoplasia of the zygomatic bone
  
  [Term]
***************
*** 2313,2329 ****
  intersection_of: inheres_in FMA:24505 ! Fourth metatarsal bone
  
- ! This should be a named term in HPO
- 
  [Term]
! id: _:short_fifth_metatarsal
! is_anonymous: true
  intersection_of: PATO:0000574 ! decreased length
  intersection_of: inheres_in FMA:24506 ! Fifth metatarsal bone
  
- ! This should be a named term in HPO
- 
  [Term]
! id: _:short_third_metatarsal
! is_anonymous: true
  intersection_of: PATO:0000574 ! decreased length
  intersection_of: inheres_in FMA:24504 ! Third metatarsal bone
--- 2310,2320 ----
  intersection_of: inheres_in FMA:24505 ! Fourth metatarsal bone
  
  [Term]
! id: HP:0010671 ! Hypoplasia of the fifth metatarsal bone
  intersection_of: PATO:0000574 ! decreased length
  intersection_of: inheres_in FMA:24506 ! Fifth metatarsal bone
  
  [Term]
! id: HP:0010673 ! Hypoplasia of the 3rd metatarsal bone
  intersection_of: PATO:0000574 ! decreased length
  intersection_of: inheres_in FMA:24504 ! Third metatarsal bone