#198 duplicated relations

[Melanie Courtot]

CL has
- two 'part_of' relations: a BFO one and a PRO one
- two 'derives_from': one from CL one from PRO
- two 'regulates'

[Alexander Diehl]

Hi Melanie,

These duplicated relations are an artifact of OBO-Edit's saving of combined ontology files, or perhaps the OORT tool, and unfortunately require hand editing to eliminate, which does not always occur as part of the release process. In any case, I believe this is a relatively minor problem as the relations are equivalent. If I am involved in the next release of CL, I will try to ensure no duplicate relations are present.

Thanks,

Alex

[Melanie Courtot]

Thanks for the reply Alex. It is an issue as even though the relations are semantically equivalent, they have different URIs. Which means if I use one in my query I won't retrieve axioms using the other, and I won't be able to query across resources.

[Chris Mungall]

Can you close this? Fixed some time ago

On 2 Dec 2014, at 13:05, Nicole Vasilevsky wrote:

• assigned_to: Alexander Diehl
• Group: --> GO-Cell-XP

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[cell-ontology-cl-requests:#198] duplicated relations

Status: open
Group: GO-Cell-XP
Labels: obsoletion request
Created: Thu May 31, 2012 09:51 PM UTC by Melanie Courtot
Last Updated: Thu May 31, 2012 09:51 PM UTC
Owner: Alexander Diehl

CL has
- two 'part_of' relations: a BFO one and a PRO one
- two 'derives_from': one from CL one from PRO
- two 'regulates'

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[Nicole Vasilevsky]

Closing, per Chris' request. :)