http://purl.obolibrary.org/obo/UBERON_0002367 prostate gland
imported as both class and instance
see: http://purl.obolibrary.org/obo/obi/dev/import/OBO_imports.owl
Need to check whether it is cause by ontoFox bug or UBERON issue.
Need to be fixed in OBI release
I removed the NamedIndividual declaration from OBO_imports.owl in commit 4079. That will fix the problem for OBI for now.
Then I looked deeper and found that OntoFox consistently includes the declaration. I can see it in their SPARQL database: http://www.ontobee.org/sparql
But I don't see it in the UBERON OWL files. Weird. I'll ask Chris Mungall.
Last edit: James A. Overton 2016-09-27
Not in uberon AFAICT.
Btw, still in SF? I advise migrating before it gets harder... https://github.com/cmungall/gosf2github/
All puns in ontobee:
I assume there is some pattern here, but I'm stumped
Ontobee developer Edison has re-uploaded the UBERON ontology. There is no individual now. Need to rerun Ontofox and check whether the output is correct.
Looks good now.