OBI / OBI Terms / #799 New term request

New term request - eCLIP

#799 New term request - eCLIP

Milestone: general

Status: closed

Owner: Chris Stoeckert

Labels: None

Priority: 5

Updated: 2016-08-29

Created: 2016-05-10

Creator: Jason Hilton

Private: No

editor preferred term: enhanced cross-linking immunoprecipitation high-throughput sequencing assay
alternate terms: eCLIP
textual definition: A UV cross-linking and immunoprecipitation followed by high-throughput sequencing assay to robustly identify protein-RNA interactions with high efficiency.
definition source for the textual definition: https://www.ncbi.nlm.nih.gov/pubmed/27018577
logical definition: iCLIP --> eCLIP

Discussion

Chris Stoeckert - 2016-07-25

assigned_to: Chris Stoeckert
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Chris Stoeckert - 2016-08-12

Jason, your proposed definition doesn't quite follow our standard form or make clear the difference from iCLIP. How about this as an alternative:
An iCLIP assay that is enhanced to robustly identify protein-RNA interactions with high efficiency through improvements in library preparation of RNA fragments.
Thanks, Chris

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Jason Hilton - 2016-08-16

Looks good.
Thanks so much for your help.

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Chris Stoeckert - 2016-08-29

status: open --> closed
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Chris Stoeckert - 2016-08-29

term added to OBI

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New term request - eCLIP

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#799 New term request - eCLIP

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