relax SVN archive

Merged revisions 7991-7992,7996 via svnmerge from
svn+ssh://bugman@.../svn/relax/1.3

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r7991 | bugman | 2008-11-20 22:53:30 +0100 (Thu, 20 Nov 2008) | 5 lines

Added a catch for bug #12607 (https://gna.org/bugs/?12607) to the bugs_12582_12591.py script.

This bug was reported by Chris Brosey (chris dot a dot brosey att vanderbilt dot edu).
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r7992 | bugman | 2008-11-20 23:23:56 +0100 (Thu, 20 Nov 2008) | 8 lines

Fix for bug #12607 (https://gna.org/bugs/?12607).

This bug was reported by Chris Brosey (chris dot a dot brosey att vanderbilt dot edu).

The problem was that the fixed flag was being checked for all spins. However deselected spins
should be ignored.
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r7996 | bugman | 2008-11-21 09:45:57 +0100 (Fri, 21 Nov 2008) | 3 lines

Renamed the bugs_12582_12591.py system test script to include bug #12607.
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Renamed the bugs_12582_12591.py system test script to include bug #12607.

Modified the noe.py sample script to use the new 'spectrum' user functions.

This copies the changes of r7994 which were made to the equivalent system test.

Modified the noe.py system test script to use the new 'spectrum' user functions.

Fixes for the 4 peak list reading system tests.

The spin specific intensities structure is now a simple list.

Fix for bug #12607 (https://gna.org/bugs/?12607).

This bug was reported by Chris Brosey (chris dot a dot brosey att vanderbilt dot edu).

The problem was that the fixed flag was being checked for all spins. However deselected spins
should be ignored.

Added a catch for bug #12607 (https://gna.org/bugs/?12607) to the bugs_12582_12591.py script.

This bug was reported by Chris Brosey (chris dot a dot brosey att vanderbilt dot edu).

Another fix for the test_read_sparky() system test.

This fixes the checking of the new spin specific 'intensities' data structure.

Modified the script to create the basic_heights_T2_ncyc1.bz2 saved state and regenerated this file.

The spectrum.read_intensities() user function is now used, and the new format of the spin specific
'intensities' data structure is in the saved state.

Fix for the test_read_sparky() system test.

The relax_fit.read() call was replaced with spectrum.read_intensities().