relax SVN archive

A large number of spacing fixes.

Added the copyright statement.

Added a newline character to the end of the file.

Spacing fixes and a few added comments.

Merged revisions 7792-7851 via svnmerge from
svn+ssh://bugman@.../svn/relax/1.3

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r7795 | bugman | 2008-10-17 00:18:03 +0200 (Fri, 17 Oct 2008) | 3 lines

Added a class docstring for the main relax class.
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r7796 | semor | 2008-10-17 00:29:26 +0200 (Fri, 17 Oct 2008) | 7 lines

Corrected some naming and syntax within docstrings and prints.

This follows a post by Edward at:
https://mail.gna.org/public/relax-devel/2008-10/msg00068.html
(message ID: 7f080ed10810161412j1910a956gd37dbd35eb0584c1@...)
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r7797 | semor | 2008-10-17 19:53:53 +0200 (Fri, 17 Oct 2008) | 7 lines

Started the implementation of a generic peak intensities file.

This follows a thread at:
https://mail.gna.org/public/relax-devel/2008-10/msg00026.html
(Message ID: 48EE7028.6060409@...)
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r7798 | semor | 2008-10-17 20:01:24 +0200 (Fri, 17 Oct 2008) | 3 lines

Started to write a system test for the support of the generic peak intensities file.
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r7799 | semor | 2008-10-17 20:22:59 +0200 (Fri, 17 Oct 2008) | 11 lines

Added prototypes for the generic peak intensities file.

Only two files will be needed, instead of one file per delay. The first file (generic_delay.txt)
will contain the different delays. The second file (generic_intensity.txt) will contain the peak
intensities.

There may also be a way of including all this information in one single file... maybe by putting
the delays in the header ? This would be even simpler for the user who would only need to input 1
single file.
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r7800 | semor | 2008-10-17 20:27:23 +0200 (Fri, 17 Oct 2008) | 6 lines

Added a generic peak intensities file including the delay times.

This is in response to r7799
(http://svn.gna.org/viewcvs/relax?rev=7799&view=rev)
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r7801 | semor | 2008-10-17 21:23:57 +0200 (Fri, 17 Oct 2008) | 3 lines

Added more to the system test for the generic peak intensities file.
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r7802 | semor | 2008-10-17 21:34:13 +0200 (Fri, 17 Oct 2008) | 3 lines

Ordered functions alphabetically.
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r7803 | bugman | 2008-10-17 23:33:39 +0200 (Fri, 17 Oct 2008) | 5 lines

Fixed the contents of the class docstring.

This was incorrectly mentioning relaxation curve-fitting and was identified by Seb.
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r7804 | semor | 2008-10-18 17:15:17 +0200 (Sat, 18 Oct 2008) | 11 lines

Created a class named Peak_lists including the classes Generic, NMRView, Sparky and Xeasy.

This solves a name clash pointed out in a post at:
https://mail.gna.org/public/relax-devel/2008-10/msg00069.html
(Message ID: 48F8E785.8090106@...)

and was proposed by Edward in a post at:
https://mail.gna.org/public/relax-devel/2008-10/msg00070.html
(Message ID: 7f080ed10810171437s2103ba32pdf9f10d1ffe0230e@...)
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r7805 | semor | 2008-10-18 17:29:11 +0200 (Sat, 18 Oct 2008) | 3 lines

Continued to add the support for the generic peak intensity file and ordered things alphabetically.
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r7806 | semor | 2008-10-18 17:32:18 +0200 (Sat, 18 Oct 2008) | 3 lines

Added a missing argument.
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r7807 | semor | 2008-10-18 17:40:46 +0200 (Sat, 18 Oct 2008) | 3 lines

Added missing arguments.
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More playing around with the STDOUT and STDERR prepending.

The 'S' character has been removed from the STDOUT stream. The 'E' error character in the STDERR
stream is now much more obvious. This could be replaced or restored with discussions.

Updates to the get_stdio_pre_strings() method including replacing ">" with "|".

The change is for better segregation of the pre-strings and the relax print outs.

Some more fixes for MPI.COMM_WORLD.size and MPI.COMM_WORLD.rank.

Bug fix. MPI.size and MPI.rank are now located in MPI.COMM_WORLD!

Alphabetical ordering of functions and methods.