relax SVN archive

Improved the tearDown() function so the temporary directory is deleted after the test.

This follows r7026 (http://svn.gna.org/viewcvs/relax?rev=7026&view=rev) and the proposal of Edward
d'Auvergne at: https://mail.gna.org/public/relax-devel/2008-07/msg00038.html (message ID:
7f080ed10807290219m18601df6nf2df7e91848a9680@...).

Added the setUp() and tearDown() functions to the palmer system test code.

A temporary directory is now created for ModelFree4 output.

This directory is only created and the function for deleting it still needs to be added.

This follows the proposal of Edward d'Auvergne at:
https://mail.gna.org/public/relax-devel/2008-07/msg00038.html (message ID:
7f080ed10807290219m18601df6nf2df7e91848a9680@...).

Uncommented a line as this was a temporary and local change which should not have been committed.

Added the "dir" variable to the palmer commands.

Removed an unused import.

Simplified the code by removing useless lines as well as converting one remaining flag to bool.

Fix in grid_search() for the checking of the set up of the N-state model.

Merged revisions 6956,6993-7019 via svnmerge from
svn+ssh://bugman@.../svn/relax/1.3

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r6956 | bugman | 2008-07-24 15:20:08 +0200 (Thu, 24 Jul 2008) | 3 lines

Another spelling fix for 'indices'.
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r6993 | semor | 2008-07-28 21:36:19 +0200 (Mon, 28 Jul 2008) | 3 lines

Started to add system tests for model-free analysis using Modelfree4.
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r6994 | semor | 2008-07-28 21:39:38 +0200 (Mon, 28 Jul 2008) | 3 lines

Alphabetical ordering...
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r6995 | semor | 2008-07-28 21:44:17 +0200 (Mon, 28 Jul 2008) | 5 lines

Added the spin_id variable.

This missing variable was found using the palmer system tests script...
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r6996 | semor | 2008-07-28 21:49:33 +0200 (Mon, 28 Jul 2008) | 3 lines

Removal of the run arguments.
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r6997 | semor | 2008-07-28 21:50:33 +0200 (Mon, 28 Jul 2008) | 3 lines

Conversion of force flags to bools.
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r6998 | semor | 2008-07-28 21:51:01 +0200 (Mon, 28 Jul 2008) | 3 lines

Conversion of force flags to bools.
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r6999 | semor | 2008-07-28 21:51:22 +0200 (Mon, 28 Jul 2008) | 3 lines

Conversion of force flags to bools.
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r7000 | semor | 2008-07-28 21:51:39 +0200 (Mon, 28 Jul 2008) | 3 lines

Conversion of force flags to bools.
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r7001 | semor | 2008-07-28 21:51:56 +0200 (Mon, 28 Jul 2008) | 3 lines

Conversion of force flags to bools.
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r7002 | semor | 2008-07-28 21:52:15 +0200 (Mon, 28 Jul 2008) | 3 lines

Conversion of force flags to bools.
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r7003 | semor | 2008-07-28 21:52:28 +0200 (Mon, 28 Jul 2008) | 3 lines

Conversion of force flags to bools.
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r7004 | semor | 2008-07-28 21:53:22 +0200 (Mon, 28 Jul 2008) | 3 lines

Conversion of force flags to bools.
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r7005 | semor | 2008-07-28 21:53:53 +0200 (Mon, 28 Jul 2008) | 3 lines

Conversion of force flags to bools.
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r7006 | semor | 2008-07-28 21:54:14 +0200 (Mon, 28 Jul 2008) | 3 lines

Conversion of force flags to bools.
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r7007 | semor | 2008-07-28 21:54:33 +0200 (Mon, 28 Jul 2008) | 3 lines

Conversion of force flags to bools.
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r7008 | semor | 2008-07-28 21:54:51 +0200 (Mon, 28 Jul 2008) | 3 lines

Conversion of force flags to bools.
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r7009 | semor | 2008-07-28 21:55:09 +0200 (Mon, 28 Jul 2008) | 3 lines

Conversion of force flags to bools.
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r7010 | semor | 2008-07-28 21:55:26 +0200 (Mon, 28 Jul 2008) | 3 lines

Conversion of force flags to bools.
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r7011 | semor | 2008-07-28 21:57:51 +0200 (Mon, 28 Jul 2008) | 3 lines

Removal of a few remaining run arguments.
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r7012 | semor | 2008-07-28 22:35:00 +0200 (Mon, 28 Jul 2008) | 5 lines

Added a check for the optionnal Modelfree4 program.

This check doesn't return a clean warning and should be improved.
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r7013 | semor | 2008-07-28 22:38:09 +0200 (Mon, 28 Jul 2008) | 3 lines

Corrected an error.
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r7014 | semor | 2008-07-28 22:44:16 +0200 (Mon, 28 Jul 2008) | 3 lines

Changed the setting of the heteronuclei to the new design.
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r7015 | semor | 2008-07-28 22:55:57 +0200 (Mon, 28 Jul 2008) | 3 lines

Corrected a typo.
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r7016 | semor | 2008-07-28 23:01:08 +0200 (Mon, 28 Jul 2008) | 3 lines

Corrected the same typo again.
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r7017 | bugman | 2008-07-29 14:32:06 +0200 (Tue, 29 Jul 2008) | 6 lines

The Modelfree4 system test is now skipped and passes if the binary executable cannot be found.

This is in response to Seb's post at https://mail.gna.org/public/relax-devel/2008-07/msg00035.html
(Message-id: <488E26B1.8010606@...>).
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r7018 | semor | 2008-07-29 16:11:31 +0200 (Tue, 29 Jul 2008) | 9 lines

Reverted revision 7012.

The command used was:
svn merge -r7012:7011 .

This follows a discussion started by Edward d'Auvergne at:
https://mail.gna.org/public/relax-devel/2008-07/msg00040.html (message ID:
7f080ed10807290154q5cd2ba33ga7135e3aad70b0ba@...).
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r7019 | semor | 2008-07-29 16:20:01 +0200 (Tue, 29 Jul 2008) | 3 lines

Correcaedt the name of the function as the complete analysis is tested, not only stage 1.
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Correcaedt the name of the function as the complete analysis is tested, not only stage 1.