relax SVN archive

Molecular dynamics by NMR data analysis

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SVN archive Commit Log

Commit	Date
[r6716] by bugman Fix for the atom_connect() method and the creation of the CONECT record. The atom_connect() method was modified to only append the atom index if it wasn't already in the bonded list. The CONECT record now uses the atom numbers and not atom indecies.	2008-07-04 23:48:08	Tree
[r6715] by bugman Fixed the creation of the CONECT records.	2008-07-04 23:24:13	Tree
[r6714] by bugman Fixed the creation of the ATOM, HETATM, and TER records.	2008-07-04 23:21:12	Tree
[r6713] by bugman The index i was being overwritten in another place as well.	2008-07-04 23:11:06	Tree
[r6712] by bugman Fix for the creation of the het_atom data structure. The index i was being overwritten!	2008-07-04 23:10:15	Tree
[r6711] by bugman Fixed the creation of the FORMUL record.	2008-07-04 23:05:10	Tree
[r6710] by bugman Fix for the creation of the HETNAM record. The None description value is replaced by 'Unknown'.	2008-07-04 23:02:39	Tree
[r6709] by bugman Modified the __get_chemical_name() to handle unidentifiable residue names.	2008-07-04 22:59:20	Tree
[r6708] by bugman Missing chain_ids are now caught and replaced by empty strings.	2008-07-04 22:57:11	Tree
[r6707] by bugman HETATM records with no residue info are now skipped in the HET record construction.	2008-07-04 22:53:42	Tree

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