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Commit Date  
[r6073] by bugman

Shifted all the molecule, residue, and spin unit tests into test_mol_spin_res.

2008-05-04 11:31:07 Tree
[r6072] by bugman

Updated the molecule, residue, and spin unit test base classes.

2008-05-04 11:27:54 Tree
[r6071] by bugman

Shifted all the unit tests of test_selection to test_mol_spin_res, and fixed the import and calls.

2008-05-04 10:26:45 Tree
[r6070] by bugman

Fixed all the broken imports.

2008-05-04 10:16:26 Tree
[r6069] by bugman

Merged revisions 6013-6068 via svnmerge from
svn+ssh://bugman@.../svn/relax/1.3

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r6015 | bugman | 2008-05-01 11:56:06 +0200 (Thu, 01 May 2008) | 3 lines

Spelling fixes: Renamed all references to 'unselect' to 'deselect' in the manual.
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r6016 | bugman | 2008-05-01 12:03:26 +0200 (Thu, 01 May 2008) | 3 lines

One last renaming of 'Unselect' to 'Deselect'.
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r6018 | bugman | 2008-05-01 12:22:02 +0200 (Thu, 01 May 2008) | 3 lines

Added a section for PyMOL in the installation chapter.
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r6020 | bugman | 2008-05-01 12:52:26 +0200 (Thu, 01 May 2008) | 3 lines

Shifted the installation chapter from chapter 1 to chapter 2.
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r6021 | bugman | 2008-05-01 12:57:34 +0200 (Thu, 01 May 2008) | 3 lines

Converted the 'How to use relax' part from a chapter to a section.
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r6022 | bugman | 2008-05-01 13:00:12 +0200 (Thu, 01 May 2008) | 3 lines

Fixed the R1 and R2 in the abbreviation section.
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r6023 | bugman | 2008-05-01 14:11:53 +0200 (Thu, 01 May 2008) | 11 lines

Improvements and expansion of the introduction chapter.

These changes are in response to the email by Johnny Croy at
https://mail.gna.org/public/relax-users/2008-04/msg00028.html (Message-id:
<4E4F6DB4-5F27-4447-9EC9-6D2E9973A539@...>). The thread continues at
https://mail.gna.org/public/relax-users/2008-05/msg00000.html (Message-id:
<50dac1510bcb.510bcb50dac1@...>).

Most of this text comes from the relax website (http://nmr-relax.com).
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r6025 | bugman | 2008-05-01 14:17:27 +0200 (Thu, 01 May 2008) | 3 lines

Shortened the short title of the 'Model-free analysis using the diffusion seeded paradigm' figure.
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r6026 | bugman | 2008-05-01 15:01:47 +0200 (Thu, 01 May 2008) | 3 lines

Updated the intro chapter to the new design.
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r6027 | bugman | 2008-05-01 15:16:09 +0200 (Thu, 01 May 2008) | 3 lines

Updated the NOE chapter of the relax manual to the new design.
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r6028 | bugman | 2008-05-01 15:17:52 +0200 (Thu, 01 May 2008) | 3 lines

Small fix for the NOE chapter. 'pipe.create' should have been written rather than 'run.create'.
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r6029 | bugman | 2008-05-01 15:30:47 +0200 (Thu, 01 May 2008) | 3 lines

More updates to the noe.py sample script for the new relax design.
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r6030 | bugman | 2008-05-01 15:31:14 +0200 (Thu, 01 May 2008) | 3 lines

More updates for the relax_fit.py sample script for the new relax design.
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r6031 | bugman | 2008-05-01 15:42:07 +0200 (Thu, 01 May 2008) | 3 lines

Updated the relaxation curve fitting chapter to the new relax design.
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r6032 | bugman | 2008-05-01 16:35:25 +0200 (Thu, 01 May 2008) | 3 lines

Completed the relaxation curve fitting chapter of the relax manual.
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r6033 | bugman | 2008-05-01 16:39:50 +0200 (Thu, 01 May 2008) | 6 lines

Added a copyright statement to the model-free.py sample script.

The purpose of this is so the user knows who the author of the script was and how ancient the script
is, as well as allowing the file to be redistributable.
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r6036 | bugman | 2008-05-01 16:43:01 +0200 (Thu, 01 May 2008) | 3 lines

Updated the model-free.py script to the new relax design.
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r6037 | bugman | 2008-05-01 16:45:25 +0200 (Thu, 01 May 2008) | 3 lines

The proton and heteronucleus types need to be set.
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r6038 | bugman | 2008-05-01 16:47:22 +0200 (Thu, 01 May 2008) | 3 lines

Removed the reference to 'run'.
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r6039 | bugman | 2008-05-01 16:47:54 +0200 (Thu, 01 May 2008) | 3 lines

Removed the call to the now non-existent 'nuclei()' user function.
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r6040 | bugman | 2008-05-01 16:49:23 +0200 (Thu, 01 May 2008) | 3 lines

Converted the model-free.py sample script presented in the model-free chapter to the new design.
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r6041 | bugman | 2008-05-01 16:51:48 +0200 (Thu, 01 May 2008) | 6 lines

Added a copyright statement to the mf_multimodel.py sample script.

The purpose of this is so the user knows who the author of the script was and how ancient the script
is, as well as allowing the file to be redistributable.
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r6043 | bugman | 2008-05-01 16:54:31 +0200 (Thu, 01 May 2008) | 3 lines

Updated the mf_multimodel.py sample script to the new relax design.
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r6044 | bugman | 2008-05-01 17:02:41 +0200 (Thu, 01 May 2008) | 6 lines

Added a copyright statement to the modsel.py sample script.

The purpose of this is so the user knows who the author of the script was and how ancient the script
is, as well as allowing the file to be redistributable.
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r6046 | bugman | 2008-05-01 17:05:05 +0200 (Thu, 01 May 2008) | 3 lines

Updated the modsel.py script to the new relax design.
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r6047 | bugman | 2008-05-01 17:06:58 +0200 (Thu, 01 May 2008) | 3 lines

Updated the rest of the model-free chapter of the relax manual to the new design.
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r6048 | bugman | 2008-05-01 17:08:46 +0200 (Thu, 01 May 2008) | 3 lines

Added the GPL to the index.
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r6049 | bugman | 2008-05-01 17:11:06 +0200 (Thu, 01 May 2008) | 3 lines

Changed all index entries of 'computer programs' to 'software'.
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r6050 | bugman | 2008-05-01 17:16:03 +0200 (Thu, 01 May 2008) | 3 lines

Removed a LaTeX file which was split into separate chapters long ago.
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r6051 | bugman | 2008-05-01 17:23:59 +0200 (Thu, 01 May 2008) | 3 lines

Updated the development chapter to the new relax design.
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r6052 | bugman | 2008-05-01 17:32:50 +0200 (Thu, 01 May 2008) | 3 lines

A few more updates to the development chapter for the new design.
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r6053 | bugman | 2008-05-01 17:34:57 +0200 (Thu, 01 May 2008) | 3 lines

Indexing fixes.
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r6054 | bugman | 2008-05-01 17:37:39 +0200 (Thu, 01 May 2008) | 3 lines

Fixed the indexing in the fetch_docstrings.py script.
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r6055 | bugman | 2008-05-01 17:40:31 +0200 (Thu, 01 May 2008) | 3 lines

Added automatic indexing for the model selection techniques.
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2008-05-04 09:58:40 Tree
[r6068] by bugman

Removed the empty molecule, residue, and spin modules.

2008-05-04 09:57:17 Tree
[r6067] by bugman

Converted the number_residue() fn to the form of the number_spin() fn.

2008-05-04 09:56:33 Tree
[r6066] by bugman

Big simplifications to the molecule and residue naming functions.

2008-05-04 09:54:18 Tree
[r6065] by bugman

Shifted all the numbering functions into generic_fns.mol_res_spin.

2008-05-04 09:48:17 Tree
[r6064] by bugman

Shifted all the naming functions into generic_fns.mol_res_spin.

2008-05-04 09:46:52 Tree
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