relax SVN archive

Removed the run argument as part of the moving to the new design.

Blocked revisions 5240,5247-5248,5250-5253 via svnmerge

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r5240 | bugman | 2008-03-28 10:06:06 +0100 (Fri, 28 Mar 2008) | 7 lines

Fix for bug #11383 (https://gna.org/bugs/?11383).

This was reported by Ryan Hoffman (https://gna.org/users/rydog).

The relax_data.display() user function is now functional again.
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r5247 | semor | 2008-04-03 03:59:22 +0200 (Thu, 03 Apr 2008) | 3 lines

Changes to the jw_mapping and model-free codes to reflect the model-free changes of r5220...
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r5248 | semor | 2008-04-03 04:15:20 +0200 (Thu, 03 Apr 2008) | 3 lines

Removed the run argument to prepare the jw_mapping code for the new design.
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r5250 | semor | 2008-04-03 04:35:30 +0200 (Thu, 03 Apr 2008) | 3 lines

Modified the calculate() function from specific_fns.jw_mapping to the new design.
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r5251 | semor | 2008-04-03 04:47:51 +0200 (Thu, 03 Apr 2008) | 3 lines

Modified the overfit_deselect(), set_frq(), set_error(), sim_return_param() and sim_return_selected() functions from specific_fns.jw_mapping to the new design.
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r5252 | semor | 2008-04-03 05:19:32 +0200 (Thu, 03 Apr 2008) | 5 lines

Continued the modifications to the new design for the set_selected_sim(), sim_pack_data() and write_columnar_results() functions from specific_fns.jw_mapping.

Those changes are based on the work already done for the consistency_tests code in the consistency_tests branch.
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r5253 | semor | 2008-04-03 05:42:40 +0200 (Thu, 03 Apr 2008) | 7 lines

Started the modification to the new design by :

1. Introducing the alias for the current data pipe (cdp).
2. replacing all instances of 'self.run = run' with the alias for the current data pipe (cdp) ;
3. introducing the exists_mol_res_spin_data() to replace 'relax_data_store.res.has_key(self.run)' instances.
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Merged revisions 5255 via svnmerge from
svn+ssh://bugman@.../svn/relax/1.3

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r5255 | bugman | 2008-04-03 10:31:42 +0200 (Thu, 03 Apr 2008) | 7 lines

Another fix for bug #11004 (https://gna.org/bugs/?11004).

This actually isn't a new bug as suggested in the emails (see the bug report for links). It is the
same division by zero problem as was fixed in r5117 (1.3 line) and r5119 (1.2 line), just a few
lines down.
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Another fix for bug #11004 (https://gna.org/bugs/?11004).

This actually isn't a new bug as suggested in the emails (see the bug report for links). It is the
same division by zero problem as was fixed in r5117 (1.3 line) and r5119 (1.2 line), just a few
lines down.

Merged revisions 5248,5250-5253 via svnmerge from
svn+ssh://semor@.../svn/relax/1.3

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r5248 | semor | 2008-04-02 22:15:20 -0400 (Wed, 02 Apr 2008) | 3 lines

Removed the run argument to prepare the jw_mapping code for the new design.
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r5250 | semor | 2008-04-02 22:35:30 -0400 (Wed, 02 Apr 2008) | 3 lines

Modified the calculate() function from specific_fns.jw_mapping to the new design.
........
r5251 | semor | 2008-04-02 22:47:51 -0400 (Wed, 02 Apr 2008) | 3 lines

Modified the overfit_deselect(), set_frq(), set_error(), sim_return_param() and sim_return_selected() functions from specific_fns.jw_mapping to the new design.
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r5252 | semor | 2008-04-02 23:19:32 -0400 (Wed, 02 Apr 2008) | 5 lines

Continued the modifications to the new design for the set_selected_sim(), sim_pack_data() and write_columnar_results() functions from specific_fns.jw_mapping.

Those changes are based on the work already done for the consistency_tests code in the consistency_tests branch.
........
r5253 | semor | 2008-04-02 23:42:40 -0400 (Wed, 02 Apr 2008) | 7 lines

Started the modification to the new design by :

1. Introducing the alias for the current data pipe (cdp).
2. replacing all instances of 'self.run = run' with the alias for the current data pipe (cdp) ;
3. introducing the exists_mol_res_spin_data() to replace 'relax_data_store.res.has_key(self.run)' instances.
........

Started the modification to the new design by :

1. Introducing the alias for the current data pipe (cdp).
2. replacing all instances of 'self.run = run' with the alias for the current data pipe (cdp) ;
3. introducing the exists_mol_res_spin_data() to replace 'relax_data_store.res.has_key(self.run)' instances.

Continued the modifications to the new design for the set_selected_sim(), sim_pack_data() and write_columnar_results() functions from specific_fns.jw_mapping.

Those changes are based on the work already done for the consistency_tests code in the consistency_tests branch.

Modified the overfit_deselect(), set_frq(), set_error(), sim_return_param() and sim_return_selected() functions from specific_fns.jw_mapping to the new design.

Modified the calculate() function from specific_fns.jw_mapping to the new design.

Merged revisions 5236,5238,5240,5247 via svnmerge from
svn+ssh://semor@.../svn/relax/1.3

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r5236 | bugman | 2008-03-27 06:32:40 -0400 (Thu, 27 Mar 2008) | 9 lines

Fix for bug #11378 (https://gna.org/bugs/?11378).

This bug was reported by Ryan Hoffman (https://gna.org/users/rydog).

The fix for the 1.3 line is very different to that for the 1.2 line. These functions have changed
significantly, and the pdb() user function doesn't exist any more! The concept is similar though.
The xh_vect variable is now set to None rather than being non-existant, and the spin is deselected.
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r5238 | bugman | 2008-03-28 04:44:20 -0400 (Fri, 28 Mar 2008) | 5 lines

Partially reverted r5236, the 'xh_vect' structure does not exist rather than being set to None.

See the post by Seb at https://mail.gna.org/public/relax-devel/2008-03/msg00008.html.
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r5240 | bugman | 2008-03-28 05:06:06 -0400 (Fri, 28 Mar 2008) | 7 lines

Fix for bug #11383 (https://gna.org/bugs/?11383).

This was reported by Ryan Hoffman (https://gna.org/users/rydog).

The relax_data.display() user function is now functional again.
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r5247 | semor | 2008-04-02 21:59:22 -0400 (Wed, 02 Apr 2008) | 3 lines

Changes to the jw_mapping and model-free codes to reflect the model-free changes of r5220...
........