relax SVN archive

Removal of the 'tensor_pdb' branch which was merged back into the 1.3 line at r2847 in 2006-11-15.

Removal of the 'error_import' branch.

This branch was merged back into the 1.3 line back at r3074, in 2007-03-04.

Fix for bug #9389 (https://gna.org/bugs/?9389).

This bug was caused by the move away from using the __builtin__ namespace. As the file is now
treated as a module from which errors must be imported, the AllRelaxErrors object was not being
created. The solution was to add the function 'all_errors()' which returns a list of all the
RelaxError objects.

Application of a patch by Seb that corrects a typo.

The patch 'patch_1.2-r3375_consistency_branch__typo' by Sebastien Morin (sebastien dot morin dot 1
at ulaval dot ca) corrects a typo in function 'set()' of file 'specific_fns/consistency_tests.py'
where 'csa' was written twice instead of first 'csa' and then 'r'.

This change follows the one at :
http://svn.gna.org/viewcvs/relax/1.2/specific_fns/jw_mapping.py?rev=3348&r1=3343&r2=3348 for
jw_mapping from which the code for consistency tests originated.

This was first reported for the jw_mapping code (bug #9562, https://gna.org/bugs/?9562).

Application of a patch that complements information given to users on consistency testing.

The patch 'patch_1.2-r3375_consistency_branch__docstring' by Sebastien Morin (sebastien dot morin
dot 1 at ulaval dot ca) adds some text in docstrings or comments of files
'maths_fns/consistency_tests.py' and 'specific_fns/consistency_tests.py' to help users understand
why and how use the consistency tests.

Application of a patch that changes the default CSA value so it's consistent with the rest of relax.

The patch 'patch_1.2-r3375_consistency_branch__CSA' by Sebastien Morin (sebastien dot morin dot 1 at
ulaval dot ca) changes the default CSA value from -170 to -172 ppm in the file
'specific_fns/consistency_tests.py'.

This change follows the one at :
http://svn.gna.org/viewcvs/relax/1.2/specific_fns/jw_mapping.py?rev=3354&r1=3353&r2=3354&view=diff
for jw_mapping from which the code for consistency tests originated.

Updated the download page for the 32 bit Windows version of relax 1.2.11.

Merged revisions 3372 via svnmerge from
svn+ssh://bugman@.../svn/relax/1.3

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r3372 | bugman | 2007-10-25 10:09:20 +0200 (Thu, 25 Oct 2007) | 8 lines

Fix for bug #10189 (https://gna.org/bugs/?10189).

This bug was reported by Douglas Kojetin (douglas dot kojetin att gmail dot com).

The problem was that the 'latex_mf_table.py' sample script was trying to write to the results file
the 'res' variable which was not defined anywhere in the script!!!
........

Blocked revisions 3359,3369 via svnmerge

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r3359 | bugman | 2007-10-21 18:04:59 +0200 (Sun, 21 Oct 2007) | 20 lines

Manually ported r3358 from the 1.2 line - the fix to bug #10022 (https://gna.org/bugs/?10022).

The command used was:
svn merge -r3357:3358 svn+ssh://bugman@.../svn/relax/1.2

.....
r3358 | bugman | 2007-10-21 17:59:42 +0200 (Sun, 21 Oct 2007) | 9 lines
Changed paths:
M /1.2/sample_scripts/full_analysis.py

Doug's patch for fixing bug #10022 (https://gna.org/bugs/?10022).

The patch by Douglas Kojetin (https://gna.org/users/dkojetin) labelled as 'patch2' and attached to
the bug report has been applied without modification.

This change fixes the convergence test in the 'full_analysis.py' script which fails when one residue
has the model None associated with it. These situations are now caught and skipped.
.....
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r3369 | bugman | 2007-10-21 23:00:02 +0200 (Sun, 21 Oct 2007) | 31 lines

Manually ported the changes to the CHANGES file for relax 1.2.11.

The command used was:
svn merge -r3361:3368 svn+ssh://bugman@.../svn/relax/1.2

.....
r3368 | bugman | 2007-10-21 22:54:32 +0200 (Sun, 21 Oct 2007) | 3 lines
Changed paths:
M /1.2/docs/CHANGES

A few fixes to the CHANGES file for version 1.2.11.


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r3362 | bugman | 2007-10-21 19:43:37 +0200 (Sun, 21 Oct 2007) | 12 lines
Changed paths:
M /1.2/docs/CHANGES

Ported r3360 from the 1.2.11 tag using the command:
svn merge -r3360:3361 svn+ssh://bugman@.../svn/relax/tags/1.2.11

.....
r3361 | bugman | 2007-10-21 19:40:36 +0200 (Sun, 21 Oct 2007) | 3 lines
Changed paths:
M /tags/1.2.11/docs/CHANGES

Updated the CHANGES file for relax version 1.2.11.
.....
.....
........

Fix for bug #10189 (https://gna.org/bugs/?10189).

This bug was reported by Douglas Kojetin (douglas dot kojetin att gmail dot com).

The problem was that the 'latex_mf_table.py' sample script was trying to write to the results file
the 'res' variable which was not defined anywhere in the script!!!