relax SVN archive

Fix for bug #9892 (https://gna.org/bugs/?9892).

This bug was reported by Douglas Kojetin <douglas dot kojetin at gmail dot com>, and was first
discussed in the post https://mail.gna.org/public/relax-users/2007-08/msg00008.html (Message-id:
<1E05882B-96B3-4875-B11B-0A6FEF423937@...>).

The fix was to simply test for the presence of the data structures. If these spin system specific
structures - 'model' and 'params' - were missing, then the bug will arise.

Application of Sebastien Morin's patch to convert all default CSA values to -172 ppm.

For the patch, see the post at https://mail.gna.org/public/relax-devel/2007-07/msg00060.html.

The patch 'patch__default_csa__l1.2_r3351' makes uniform the use of the CSA value (now -172 ppm
everywhere) and fixes the test-suite (in jw_mapping) to account for this change.

Blocked revisions 3352 via svnmerge

........
r3352 | bugman | 2007-08-06 13:28:05 +0200 (Mon, 06 Aug 2007) | 9 lines

Application of Sebastien Morin's patch creating the N15_CSA and NH_BOND_LENGTH constants.

For the patch, see the post at https://mail.gna.org/public/relax-devel/2007-07/msg00060.html.

The patch 'patch__default_csa_r__l1.3_r3351' makes uniform the use of the CSA value (now -172 ppm
everywhere) and fixes the test-suite (in jw_mapping) to account for this change. It also adds two
constants for the CSA and NH bond length default values.
........

Application of Sebastien Morin's patch creating the N15_CSA and NH_BOND_LENGTH constants.

For the patch, see the post at https://mail.gna.org/public/relax-devel/2007-07/msg00060.html.

The patch 'patch__default_csa_r__l1.3_r3351' makes uniform the use of the CSA value (now -172 ppm
everywhere) and fixes the test-suite (in jw_mapping) to account for this change. It also adds two
constants for the CSA and NH bond length default values.

Application of Seb's patch 'patch_consistency_tests__l1.2_r3342-1-b'.

The patch is located at https://mail.gna.org/public/relax-devel/2007-07/msg00059.html.

The patch 'patch_consistency_tests__l1.2_r3342-1-b' adds the variables 'orientation' and 'tc' to the
relax results files (by adding them in the file 'specific_fns/consistency_tests.py').

Application of Seb's patch 'patch_consistency_tests__l1.2_r3342-1-a'.

The patch is located at https://mail.gna.org/public/relax-devel/2007-07/msg00059.html.

The patch 'patch_consistency_tests__l1.2_r3342-1-a' fixes missing variables ('orientation' and 'tc')
in the 'set()' function in the file 'specific_fns/consistency_tests.py'.

Blocked revisions 3346 via svnmerge

........
r3346 | bugman | 2007-07-22 18:25:39 +0200 (Sun, 22 Jul 2007) | 10 lines

Application of Seb's patch 'patch__empty_line_after_docstring__1.3_r3342'.

The patch is located at https://mail.gna.org/public/relax-devel/2007-07/msg00047.html.

This patch (patch__empty_line_after_docstring__1.3_r3342) fixes formating issues concerning missing
empty lines after docstrings as found using the code_validator script. Two other small changes are
also made in the 'float.py' file where a docstring was introduced with 4 ' symbols ('''') instead of
3 (''') and where there was no space between a # symbol and the following text (a comment).
........

Merged revisions 3345 via svnmerge from
svn+ssh://bugman@.../svn/relax/1.3

........
r3345 | bugman | 2007-07-22 18:19:33 +0200 (Sun, 22 Jul 2007) | 10 lines

Fix for bug #9562 (http://gna.org/bugs/?9562).

This bug was reported and fixed by Sebastien Morin (sebastien dot morin dot 1 at ulaval dot ca) by
the patch 'patch__specific_fns__jw_mapping__l1.3_r3342' attached to the bug report.

In the 1.3 line, revision 3342, there is a typo in the 'set()' function of the file
'specific_fns/jw_mapping.py'. The string 'csa' is used twice on line 398. The string 'csa' should
be used first and, then, the string 'r'.
........

Blocked revisions 3339-3340,3342 via svnmerge

........
r3339 | bugman | 2007-07-10 19:43:27 +0200 (Tue, 10 Jul 2007) | 7 lines

Application of Sebastien Morin's 'patch__trailing_whitespace_good' patch.

The file 'dx/isosurface_3D.py' was excluded from the patch set just to be on the safe side - the
changes to this file could cause the OpenDX programs to fail. See the post at
https://mail.gna.org/public/relax-devel/2007-07/msg00031.html for details.
........
r3340 | bugman | 2007-07-12 11:34:48 +0200 (Thu, 12 Jul 2007) | 8 lines

Application of Sebastien Morin's patch 'patch__indentation__r3339'.

See the post at https://mail.gna.org/public/relax-devel/2007-07/msg00030.html for details.

This patch fixes the indentation issues - violations of the 4 spaces for a tab - within the 1.3
line.
........
r3342 | bugman | 2007-07-17 18:42:08 +0200 (Tue, 17 Jul 2007) | 11 lines

Application of Sebastien Morin's 'patch__function_spacing__1.3_r3341' patch.

See the post at https://mail.gna.org/public/relax-devel/2007-07/msg00037.html for the patch.

This patch (patch__function_spacing__1.3_r3341) fixes function spacing formating
issues in the 1.3 line (r3341). The convention is to leave two empty lines
before a function definition. The issues were found with the code_validator
script and filtered so that when a function definition followed a class
docstring or class variable, only one empty line is left instead of two.
........

Application of Seb's patch 'patch__empty_line_after_docstring__1.3_r3342'.

The patch is located at https://mail.gna.org/public/relax-devel/2007-07/msg00047.html.

This patch (patch__empty_line_after_docstring__1.3_r3342) fixes formating issues concerning missing
empty lines after docstrings as found using the code_validator script. Two other small changes are
also made in the 'float.py' file where a docstring was introduced with 4 ' symbols ('''') instead of
3 (''') and where there was no space between a # symbol and the following text (a comment).