Menu

Commit [r27277]  Maximize  Restore  History

Created the Structure.test_align_CaM_BLOSUM62 system test.

This will be used for expanding the functionality of the structure.align user function to perform
true sequence alignment via the new lib.sequence_alignment package. The test aligns 3 calmodulin
(CaM) structures from different organisms, hence the sequence numbering is different and the current
structure.align user function design fails. The structure.align user function has been expanded in
the test to include a number of arguments for advanced sequence alignment.

bugman 2015-01-22

added /trunk/test_suite/shared_data/structures/1J7O.pdb
added /trunk/test_suite/shared_data/structures/1J7P.pdb
added /trunk/test_suite/shared_data/structures/1OSA.pdb
added /trunk/test_suite/system_tests/scripts/n_state_model/structure_align.py
changed /trunk/test_suite/system_tests/structure.py
/trunk/test_suite/system_tests/scripts/n_state_model/structure_align.py Diff Switch to side-by-side view
Loading...
/trunk/test_suite/system_tests/structure.py Diff Switch to side-by-side view
Loading...
Want the latest updates on software, tech news, and AI?
Get latest updates about software, tech news, and AI from SourceForge directly in your inbox once a month.