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[r26920] by bugman

Added relax scripts which match the Frame_order.test_test_simulate_* system tests.

These are the tests of the frame_order.simulate user function. These were used to construct and
visually check the Brownian simulation and PDB model representation in a molecular viewer. These
could be a useful reference, so have been added to the repository.

2014-12-03 15:23:56 Tree
[r26919] by bugman

Created two system tests for the frame_order.simulate user function for the double rotor model.

These are Frame_order.test_simulate_double_rotor_mode1_xz_plane_tilt and
Frame_order.test_simulate_double_rotor_mode2_xz_plane_tilt.

2014-12-03 15:21:55 Tree
[r26918] by bugman

Created two system tests for the frame_order.simulate user function for the double rotor model.

These are Frame_order.test_simulate_double_rotor_mode1_z_axis and
Frame_order.test_simulate_double_rotor_mode2_z_axis.

2014-12-03 15:07:24 Tree
[r26917] by bugman

Improved checking for the frame order generate_pivot() function.

The check_model() checking object is now called to make sure the frame order model has been
specified, as this is essential for this function.

2014-12-03 14:11:46 Tree
[r26916] by bugman

Converted the specific_analyses.frame_order.checks module to the new Check object design.

This follows from http://wiki.nmr-relax.com/Relax_source_design#The_check_.2A.28.29_functions and
the changes significantly simplify the checking objects.

2014-12-03 14:08:26 Tree
[r26915] by bugman

Added the pipe_name argument to the frame order check_model() function.

This is for the specific_analyses.frame_order.checks module.

2014-12-03 13:48:46 Tree
[r26914] by bugman

Expanded the double rotor model description in the frame_order.select_model user function.

2014-12-03 13:38:20 Tree
[r26913] by bugman

Expanded all of the Frame_order.test_simulate_* system tests.

Two atoms have been added to the origin [0, 0, 0], one in the moving domain, the other in the
reference non-moving domain. The positions of these atoms are checked to make sure that the domain
systems are correctly handled.

2014-12-03 10:09:52 Tree
[r26912] by bugman

Merged revisions 26907 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

........
r26907 | bugman | 2014-12-03 08:50:18 +0100 (Wed, 03 Dec 2014) | 3 lines

Grammar fix for a warning from the pymol.display user function.
........

2014-12-03 10:06:21 Tree
[r26911] by bugman

Updated all frame order system tests for the frame_order.ref_domain user function requirement.

2014-12-03 09:25:58 Tree
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