relax SVN archive

Created two system tests for the frame_order.simulate user function for the double rotor model.

These are Frame_order.test_simulate_double_rotor_mode1_xz_plane_tilt and
Frame_order.test_simulate_double_rotor_mode2_xz_plane_tilt.

Created two system tests for the frame_order.simulate user function for the double rotor model.

These are Frame_order.test_simulate_double_rotor_mode1_z_axis and
Frame_order.test_simulate_double_rotor_mode2_z_axis.

Improved checking for the frame order generate_pivot() function.

The check_model() checking object is now called to make sure the frame order model has been
specified, as this is essential for this function.

Converted the specific_analyses.frame_order.checks module to the new Check object design.

This follows from http://wiki.nmr-relax.com/Relax_source_design#The_check_.2A.28.29_functions and
the changes significantly simplify the checking objects.

Added the pipe_name argument to the frame order check_model() function.

This is for the specific_analyses.frame_order.checks module.

Expanded the double rotor model description in the frame_order.select_model user function.

Expanded all of the Frame_order.test_simulate_* system tests.

Two atoms have been added to the origin [0, 0, 0], one in the moving domain, the other in the
reference non-moving domain. The positions of these atoms are checked to make sure that the domain
systems are correctly handled.

Merged revisions 26907 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

........
r26907 | bugman | 2014-12-03 08:50:18 +0100 (Wed, 03 Dec 2014) | 3 lines

Grammar fix for a warning from the pymol.display user function.
........

Updated all frame order system tests for the frame_order.ref_domain user function requirement.

Updated the frame_order.ref_domain user function for the current branch design.

This user function was quite out of date. The alignment tensor checks have been removed, to allow
this to be used in the absence of base data. And the user function description has been updated.