relax SVN archive

Redirect for the old pdb user function to the structure.read_pdb user function.

The page http://www.nmr-relax.com/manual/pdb.html redirects to
http://www.nmr-relax.com/manual/structure_read_pdb.html.

Redirect for the old frame_order.cone_pdb user function which as renamed to frame_order.pdb_model.

This is at http://www.nmr-relax.com/manual/frame_order_cone_pdb.html. It redirects to the page
http://www.nmr-relax.com/manual/frame_order_pdb_model.html.

Added Troels E. Linnet to the COMMITTERS file, which has not been updated in almost 3 years!

Shifted the Freecode link at http://www.nmr-relax.com/links.html to the bottom.

This is because Freecode is dead.

Updated the base script for the Frame_order.test_cam_* system tests.

The frame_order.simulate user function is now called directly after the frame_order.pdb_model user
function.

Small fix for the new frame_order.simulate user function backend.

Updated the frame order auto-analysis to call the new frame_order.simulate user function.

Although not implemented yet, this allows the user function to create the simulation PDB file in the
future.

Reverted r25927 as this should have been in the frame_order_cleanup branch, not the trunk!!!

The command used was:
svn merge -r25927:r25926 .

.....
r25927 | bugman | 2014-09-19 18:29:51 +0200 (Fri, 19 Sep 2014) | 6 lines
Changed paths:
M /trunk/auto_analyses/frame_order.py

Updated the frame order auto-analysis to call the new frame_order.simulate user function.

Although not implemented yet, this allows the user function to create the simulation PDB file in the
future.
.....

Updated the frame order auto-analysis to call the new frame_order.simulate user function.

Although not implemented yet, this allows the user function to create the simulation PDB file in the
future.

Spun out part of the frame_order.pdb_model user function into the new frame_order.simulate.

The new user function arguments required for properly creating the pseudo-Brownian dynamics
simulation would have made the frame_order.pdb_model user function too complicated. Therefore this
part has been spun out into the new frame_order.simulate user function. The frame_order.simulate
frontend fully describes the algorithm that will be used to simulate the dynamic content of the PCS
and RDC data, and warns that not all modes of motion are visible and present.