Commit | Date | |
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[r25355]
by
tlinnet
Inserted checks for C module is available in module for estimateing R2eff error. task #7822(https://gna.org/task/index.php?7822): Implement user function to estimate R2eff and associated errors for exponential curve fitting. |
2014-08-27 19:08:45 | Tree |
[r25354]
by
tlinnet
Moved code around, and made function multifit_covar() independent of Class object. task #7822(https://gna.org/task/index.php?7822): Implement user function to estimate R2eff and associated errors for exponential curve fitting. |
2014-08-27 19:02:30 | Tree |
[r25353]
by
tlinnet
Cleaned up code in R2eff error module. Also removed a non working Hessian matrix. task #7822(https://gna.org/task/index.php?7822): Implement user function to estimate R2eff and associated errors for exponential curve fitting. |
2014-08-27 18:55:08 | Tree |
[r25352]
by
tlinnet
Added several tests to: test_estimate_r2eff_error, to compare different output from algorithms. task #7822(https://gna.org/task/index.php?7822): Implement user function to estimate R2eff and associated errors for exponential curve fitting. |
2014-08-27 18:55:06 | Tree |
[r25351]
by
tlinnet
Fix to systemtest test_estimate_r2eff_error(), to first delete the old error estimations. task #7822(https://gna.org/task/index.php?7822): Implement user function to estimate R2eff and associated errors for exponential curve fitting. |
2014-08-27 18:55:05 | Tree |
[r25350]
by
tlinnet
Added back-end to estimate R2eff errors. task #7822(https://gna.org/task/index.php?7822): Implement user function to estimate R2eff and associated errors for exponential curve fitting. |
2014-08-27 18:06:28 | Tree |
[r25349]
by
tlinnet
Modified systemtest Relax_disp.test_estimate_r2eff() to first do a Grid Search, then minimise and then estimate the errors for R2eff and i0. task #7822(https://gna.org/task/index.php?7822): Implement user function to estimate R2eff and associated errors for exponential curve fitting. |
2014-08-27 18:06:26 | Tree |
[r25348]
by
tlinnet
Added method to automatically perform error analysis on peak heights. task #7822(https://gna.org/task/index.php?7822): Implement user function to estimate R2eff and associated errors for exponential curve fitting. |
2014-08-27 18:06:24 | Tree |
[r25347]
by
tlinnet
Added front-end to the new user function relax_disp.r2eff_err_estimate(), which will estimate the R2eff errors The co-variance matrix can be calculated from the optimised parameters, and the Jacobian. Big care should be taken not to directly trust these results, since the errors are quite different compared to the Monte-Carlo simulations. This implementation, will reach the exact same error estimation as scipy.optimize.leastsq. But with much better control over the data, and insight into the calculations. task #7822(https://gna.org/task/index.php?7822): Implement user function to estimate R2eff and associated errors for exponential curve fitting. |
2014-08-27 18:06:23 | Tree |
[r25346]
by
tlinnet
Removed the user function to estimate the R2eff values and errors with scipy.optimize.leastsq. With the newly implemented Jacobian and Hessian of the exponential decay function, the front-end to This is because minfx is now as fast as scipy.optimize.leastsq, and can estimate the errors from the In addition to that, the covariance can be calculated by QR decomposition. The back-end wilÃl still be kept in place for the coming tim, but could be removed later. task #7822(https://gna.org/task/index.php?7822): Implement user function to estimate R2eff and associated errors for exponential curve fitting. |
2014-08-27 18:06:21 | Tree |