relax SVN archive

Modified the specific_analyses.frame_order.parameters.update_model() function.

This will no longer set all parameters to 0.0, excluding the pivot point.

The Frame_order.test_auto_analysis system test now writes all files to the directory of ds.tmpdir.

This is to prevent the system test from dumping files in the current directory.

Created a method in the frame order auto-analysis to reorder the models.

This is needed as the nested model parameter copying protocol requires the simpler models to be
optimised first.

Fix for the frame order auto-analysis for the call to the grid search user function.

This user function has been renamed to minimise.grid_search, however not all parts of the analysis
had been converted to the new name.

Fixes for the backend script of the Frame_order.test_auto_analysis system test.

This includes a missing import and the removal of a long ago deleted user function.

Alphabetical ordering of the imports in the frame order auto-analysis module.

Import fix for the frame order auto-analysis.

Created the Frame_order.test_auto_analysis system test.

This will be an extremely quick run through of the frame order auto-analysis as this is not
currently tested. 1 Sobol' quasi-random integration point will be used for all models for speed.
The system test uses the rigid CaM test data to perform a full analysis.

Redesign and expansion of the nested model parameter copying in the frame order auto-analysis.

The nested parameter protocol used to allow the analysis to complete in under 1,000,000 years was no
longer functional due to the switching to the axis alpha parameter to decrease parameter number and
redundancy. The copying of the average domain position for the free rotor models was also incorrect
as the dropping of the alpha Euler angle cause the translation parameters and beta and gamma angles
to change drastically.

The new protocol has been split into four methods for the average domain position, the pivot point,
the motional eigenframe and the parameters of ordering. These use the fact that the free rotor and
torsionless models are the two extrema of the models where the torsion angle is restricted. The
pivot copying is a new addition.

Fix for the Frame_order.test_cam_pseudo_ellipse_free_rotor system test.

This is for the change of the X and Y cone opening angles.