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[r24618] by bugman

Deleted the lib.optimisation module.

The checks in the single test_grid_ops() function are implemented in the
pipe_control.minimise.grid_setup() function and are now redundant.

2014-07-22 14:01:23 Tree
[r24617] by bugman

Created the specific analysis parameter object _add_align_tensor() method.

When called by a specific analysis, this will add the [Axx, Ayy, Axy, Axz, Ayz] parameters to the
corresponding parameter object.

2014-07-22 13:55:57 Tree
[r24616] by bugman

Created the _print_model_title_global() specific analysis API method.

This is to be paired with the _model_loop_single_global() API method and it simply prints out the
prefix as the title.

2014-07-22 13:36:26 Tree
[r24615] by tlinnet

Reverted r24323 as relax dependency of numpy is now 1.6 where "einsum" function is available.

The command used was:
svn merge -r24323:r24322 .

.....
r24323 | tlinnet | 2014-06-25 19:31:40 +0200 (Wed, 25 Jun 2014) | 3 lines

Implemented a dependency check for numpy einsum, so relax can still start.

Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models for Clustered analysis.
.....

2014-07-22 13:35:16 Tree
[r24614] by tlinnet

Reverted r24337 as relax dependency of numpy is now 1.6 where the "out" argument is available.

The command used was:
svn merge -r24337:r24336 .

.....
r24337 | tlinnet | 2014-06-27 12:58:24 +0200 (Fri, 27 Jun 2014) | 8 lines

Added a numpy "out" argument check to dep_check.py.

This is for checking the out argument of:
numpy.multiply
numpy.add
numpy.subtract

Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models for Clustered analysis.
.....

2014-07-22 13:27:44 Tree
[r24613] by tlinnet

Reverted r24336 as relax dependency of numpy is now 1.6 where the "einsum" function is available.

The command used was:
svn merge -r24336:r24335 .

.....
r24336 | tlinnet | 2014-06-27 12:58:22 +0200 (Fri, 27 Jun 2014) | 3 lines

Added to target function that experiment_type_setup() should not be initiated, if numpy.einsum is missing.

Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models for Clustered analysis.
.....

2014-07-22 13:23:47 Tree
[r24612] by tlinnet

Reverted r24339 as relax dependency of numpy is now 1.6 where the "out" argument is available.

The command used was:
svn merge -r24339:r24338 .

.....
r24339 | tlinnet | 2014-06-27 12:58:29 +0200 (Fri, 27 Jun 2014) | 3 lines

Added a list of systemtests to skip, if numpy "out" argument is not available.

Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models for Clustered analysis.
.....

2014-07-22 13:16:47 Tree
[r24611] by bugman

Removed some excess empty lines in specific_analyses.api.

2014-07-22 13:11:33 Tree
[r24610] by bugman

Import fix for the N-state model parameter object in the specific API return_parameter_object() function.

2014-07-22 13:11:04 Tree
[r24609] by bugman

Updated the NOE analysis to handle the changes for the minimise.calculate user function.

This now requires the model_loop() and get_param_names() API methods to be implemented. The first
is provided by the API common _model_loop_spin() method and the second simply returns a list of the
single 'noe' parameter.

2014-07-22 13:02:58 Tree
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