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Change all of the domain user function calls in the frame order CaM test data scripts.

The domains are now identified by the molecule name rather than the range of residues. This allows
non-protein atoms, for example the Ca2+ atoms, to be rotated to the average domain position as well.

bugman 2014-07-03

changed /branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/double_rotor/frame_order.py
changed /branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/free_rotor/frame_order.py
changed /branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/free_rotor2/frame_order.py
changed /branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/free_rotor_missing_data/frame_order.py
changed /branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/full_analysis.py
changed /branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/iso_cone/frame_order.py
changed /branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/iso_cone_free_rotor/frame_order.py
changed /branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/iso_cone_free_rotor2/frame_order.py
changed /branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/iso_cone_torsionless/frame_order.py
changed /branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/frame_order.py
changed /branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/multi_processor_test.py
changed /branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse2/frame_order.py
changed /branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse_free_rotor/frame_order.py
changed /branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse_torsionless/frame_order.py
changed /branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rigid/frame_order.py
changed /branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rigid/rotor_analysis/frame_order.py
changed /branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor/frame_order.py
changed /branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor2/frame_order.py
changed /branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor2/pcs_only/frame_order.py
changed /branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor_2_state/frame_order.py
changed /branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor_small_angle/frame_order.py
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/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/free_rotor/frame_order.py Diff Switch to side-by-side view
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/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/free_rotor2/frame_order.py Diff Switch to side-by-side view
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/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/free_rotor_missing_data/frame_order.py Diff Switch to side-by-side view
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/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/full_analysis.py Diff Switch to side-by-side view
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/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/iso_cone/frame_order.py Diff Switch to side-by-side view
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/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/iso_cone_free_rotor/frame_order.py Diff Switch to side-by-side view
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/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/iso_cone_free_rotor2/frame_order.py Diff Switch to side-by-side view
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/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/iso_cone_torsionless/frame_order.py Diff Switch to side-by-side view
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/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/frame_order.py Diff Switch to side-by-side view
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/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/pseudo_ellipse/multi_processor_test.py Diff Switch to side-by-side view
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/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rigid/frame_order.py Diff Switch to side-by-side view
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/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rigid/rotor_analysis/frame_order.py Diff Switch to side-by-side view
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/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor2/frame_order.py Diff Switch to side-by-side view
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/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor2/pcs_only/frame_order.py Diff Switch to side-by-side view
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/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor_2_state/frame_order.py Diff Switch to side-by-side view
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/branches/frame_order_cleanup/test_suite/shared_data/frame_order/cam/rotor_small_angle/frame_order.py Diff Switch to side-by-side view
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