Menu

SVN archive Commit Log


Commit Date  
[r24404] by bugman

Test suite fixes for the recent redesign of the frame_order.pdb_model user function.

2014-07-02 11:40:45 Tree
[r24403] by bugman

The frame order generate_pivot() function can now return the pivots for Monte Carlo simulations.

This is the specific_analyses.frame_order.data.generate_pivot() function. The sim_index argument
has been added to the function which will allow the pivots from the Monte Carlo simulations to be
returned. If the pivot was fixed, then the original pivot will be returned instead.

2014-07-02 09:59:23 Tree
[r24402] by bugman

Improvements to the lib.structure.represent.rotor.rotor() function for handling models.

The 'rotor', 'rotor2', or 'rotor3' molecule name determination is now also model specific.

2014-07-02 09:57:18 Tree
[r24401] by bugman

Merged revisions 24396,24399 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

........
r24396 | bugman | 2014-07-02 09:50:36 +0200 (Wed, 02 Jul 2014) | 6 lines

Python 3 fixes for the entire codebase using the 2to3 script.

The command used was:
2to3 -j 4 -w -f xrange .
........
r24399 | bugman | 2014-07-02 11:46:40 +0200 (Wed, 02 Jul 2014) | 5 lines

The internal structural object add_molecule() and has_molecule() methods are now model specific.

This allows for finer control of structural object.
........

2014-07-02 09:55:35 Tree
[r24400] by bugman

Merged revisions 24399 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

........
r24399 | bugman | 2014-07-02 11:46:40 +0200 (Wed, 02 Jul 2014) | 5 lines

The internal structural object add_molecule() and has_molecule() methods are now model specific.

This allows for finer control of structural object.
........

2014-07-02 09:54:17 Tree
[r24399] by bugman

The internal structural object add_molecule() and has_molecule() methods are now model specific.

This allows for finer control of structural object.

2014-07-02 09:46:40 Tree
[r24398] by bugman

Merged revisions 24396 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

........
r24396 | bugman | 2014-07-02 09:50:36 +0200 (Wed, 02 Jul 2014) | 6 lines

Python 3 fixes for the entire codebase using the 2to3 script.

The command used was:
2to3 -j 4 -w -f xrange .
........

2014-07-02 07:57:10 Tree
[r24397] by bugman

Python 3 fixes using the 2to3 script.

Fatal changes to the multi.processor module were reverted.

The command used was:
2to3 -j 4 -w \
-f buffer \
-f idioms \
-f set_literal \
-f ws_comma \
-x except \
-x import \
-x imports \
-x long \
-x numliterals \
-x xrange \
.

2014-07-02 07:54:00 Tree
[r24396] by bugman

Python 3 fixes for the entire codebase using the 2to3 script.

The command used was:
2to3 -j 4 -w -f xrange .

2014-07-02 07:50:36 Tree
[r24395] by bugman

Merged revisions 24390-24391 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

........
r24390 | bugman | 2014-07-02 09:37:42 +0200 (Wed, 02 Jul 2014) | 17 lines

General Python 3 fixes via the 2to3 script.

The command used was:
2to3 -j 4 -w \
-f buffer \
-f idioms \
-f set_literal \
-f ws_comma \
-x except \
-x import \
-x imports \
-x long \
-x numliterals \
-x xrange \
.
........
r24391 | bugman | 2014-07-02 09:42:01 +0200 (Wed, 02 Jul 2014) | 7 lines

Removed the lib.compat.sorted() function which was providing Python2.3 compatibility.

For a while now, relax has been unable to run on Python versions less than 2.5. Therefore there is
no use for having this replacement function for Python <= 2.3 which was being placed into the
builtins module.
........

2014-07-02 07:44:28 Tree
Older >
Want the latest updates on software, tech news, and AI?
Get latest updates about software, tech news, and AI from SourceForge directly in your inbox once a month.