relax SVN archive

Needed to increase the relative tolerance when testing if pA array is 1.

Now system test Relax_disp.test_hansen_cpmg_data_missing_auto_analysis passes.

Also added some comments lines, to prepare for mask replace of values.
For example if only some of etapos values should be replaced.

Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models for Clustered analysis.

Very important fix, for only replacing part of data array which have Nan values.

Before, all values were replaced, which was wrong.

Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models for Clustered analysis.

Fixed that arrays are correctly initiated with one or zero values.

Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models for Clustered analysis.

Small edit to profiling script, to help bug finding.

Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models for Clustered analysis.

Made the back_calc array be initiated as copy of the values array.

Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models for Clustered analysis.

Reordered arrays for beauty of code.

Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models for Clustered analysis.

Removed all looping over spin and spectrometer frequency.

This is the last loop!
Wuhu.

Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models for Clustered analysis.

Removed dw_frq_a numpy array, as it was not necessary.

Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models for Clustered analysis.

Moved the calculation of pA and kex out off all loopes.

This was done by having two special 1/0 spin structure arrays.

Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models for Clustered analysis.

Merged revisions 23753 via svnmerge from
svn+ssh://tlinnet@.../svn/relax/trunk

........
r23753 | tlinnet | 2014-06-09 19:23:21 +0200 (Mon, 09 Jun 2014) | 7 lines

Added searching for enviroment variable PYTHON_INCLUDE_DIR if Python.h is not found in
standard python library.

This can be very handsome, if one has a python virtual enviroment for multiple users.

This relates to the wiki page:
http://wiki.nmr-relax.com/Epd_canopy
........