relax SVN archive

Partial fix for bug #22100.

This is the bug report at https://gna.org/bugs/?22100, the rotation argument for the
structure.rotate user function cannot be changed in the GUI, as an AttributeError is raised.

The append_row() method call has been replaced by the correct add_element() call.

Modified the dim dimensions to (None, 4) to allow the user to change number of points in the GUI.

THe first dimension was used as a counter, the last 3 dimensions is for x,y,z position.

This is for the user function dx.map.

Modified the dim dimensions to (None, 3) to allow the user to change number of points in the GUI.

This is for the user function dx.map.

Expanded the User_functions.test_structure_rotate GUI test.

This is to more extensively check the 'float_matrix' user function argument type in the GUI.

Some more fixes for the User_functions.test_structure_rotate GUI test.

The open_dialog() method cannot be used, as it deletes the window at the end. Instead the
selection_win_show() and selection_win_data() method combination is used.

Removed the 8th unit test for model NS CPMG 2site extended.

This was the catching of errors when kex has high values.

The model cannot handle this situations, and we need to let it fail.

Removed the 8th unit test for model NS CPMG 2site 3D.

This was the catching of errors when kex=1e20.

The model cannot handle this situations, and we need to let it fail.

Removed nested looping of returning back_calc in lib/ns_cpmg_2site_3d.

Merged revisions 23488,23490-23493,23495-23500 via svnmerge from
svn+ssh://tlinnet@.../svn/relax/trunk

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r23488 | bugman | 2014-05-28 08:59:22 +0200 (Wed, 28 May 2014) | 5 lines

Modified the frame order constraints so that cone_theta_x <= cone_theta_y.

The linear_constraints() function docstring has been updated to include this constraint.
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r23490 | tlinnet | 2014-05-28 10:25:14 +0200 (Wed, 28 May 2014) | 1 line

Set dim=4 when setting chi surface level in user function dx.map.
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r23491 | bugman | 2014-05-28 10:31:49 +0200 (Wed, 28 May 2014) | 5 lines

Fix for the n_state_model.cone_pdb user function for the recent internal structural object changes.

The cone arguments should now be called cone_obj.
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r23492 | bugman | 2014-05-28 10:39:21 +0200 (Wed, 28 May 2014) | 7 lines

Fix for the frame_order.pdb_model user function for the rotor models.

The rotor axis is no longer defined by spherical angles and therefore needs to be recreated using
the create_rotor_axis_alpha() rather than create_rotor_axis_spherical() function from
lib.frame_order.rotor_axis.
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r23493 | bugman | 2014-05-28 11:05:16 +0200 (Wed, 28 May 2014) | 5 lines

Renamed the relax_disp.set_grid_r20_from_min_r2eff user function to relax_disp.r20_from_min_r2eff.

This follows from the proposal at http://thread.gmane.org/gmane.science.nmr.relax.devel/5957.
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r23495 | bugman | 2014-05-28 11:19:56 +0200 (Wed, 28 May 2014) | 7 lines

Modification to the Sequence_2D GUI element used for some user function windows.

The selection_win_show() method has been redefined, as the parent method from the Sequence element
is specific for the 1D sequence module. The open_dialog() method has also been modified to use the
new selection_win_show(), as well as the parent Sequence class selection_win_data() method.
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r23496 | bugman | 2014-05-28 11:26:48 +0200 (Wed, 28 May 2014) | 6 lines

Created the User_functions.test_structure_rotate GUI tests.

This is to catch bug #22100 (https://gna.org/bugs/?22100), the rotation argument for the
structure.rotate user function cannot be changed in the GUI, as an AttributeError is raised.
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r23497 | tlinnet | 2014-05-28 11:28:30 +0200 (Wed, 28 May 2014) | 1 line

Moved py_type "list_val_or_list_of_list_val" to 2D sequence types.
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r23498 | tlinnet | 2014-05-28 11:28:32 +0200 (Wed, 28 May 2014) | 1 line

Added dim dimensions to match the x,y,z positions for GUI input in user function dx.map.
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r23499 | bugman | 2014-05-28 11:29:57 +0200 (Wed, 28 May 2014) | 3 lines

Modified the User_functions.test_structure_rotate GUI test to change and check the rotation matrix.
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r23500 | bugman | 2014-05-28 11:31:19 +0200 (Wed, 28 May 2014) | 3 lines

Fixes for some big mistakes in the previous commit.
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Fixes for some big mistakes in the previous commit.