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[r23148] by tlinnet

Added "numpy_future" to the __init__.py file in lib directory.

task #7792: (https://gna.org/task/?7792) Make the dx.map write suggest chi surface values.

2014-05-10 08:06:52 Tree
[r23147] by tlinnet

Added lib/numpy_future.py.

This module is for implementing numpy function code from higher versions of numpy.

The relax dependencies listed at the download page of relax:
http://www.nmr-relax.com/download.html#Source_code_release
currently only requires Numpy v. 1.0.4.

task #7792: (https://gna.org/task/?7792) Make the dx.map write suggest chi surface values.

2014-05-10 08:06:50 Tree
[r23146] by tlinnet

Changed the percentage which is different in percentile from numpy_future.

task #7792: (https://gna.org/task/?7792) Make the dx.map write suggest chi surface values.

2014-05-10 08:06:49 Tree
[r23145] by tlinnet

Changed the import of percentile from lib.mathematics to lib.numpy_future.

task #7792: (https://gna.org/task/?7792) Make the dx.map write suggest chi surface values.

2014-05-10 08:06:46 Tree
[r23144] by tlinnet

Fix for systemtest Relax_dips.test_cpmg_synthetic_dx_map_points.

Removing keyword "remap", since this is not in use anymore.

task #7792: (https://gna.org/task/?7792) Make the dx.map write suggest chi surface values.

2014-05-10 06:45:47 Tree
[r23143] by tlinnet

Reverted r23140 as this violated the license of http://code.activestate.com.

The recipe, was a function to compute the percentile of range of values.
This is because that numpy.percentile is first introduced in 1.6?

The recipe was from:
http://code.activestate.com/recipes/511478-finding-the-percentile-of-the-values/.

The command used was:
svn merge -r23140:23139 .

.....
Added mathematics functions to lib/mathematics.py to calculate percentile.

This is because percentile is only available in numpy 1.9.

task #7792: (https://gna.org/task/?7792) Make the dx.map write suggest chi surface values.

Modified:
trunk/lib/mathematics.py
.....

2014-05-10 06:43:20 Tree
[r23142] by bugman

Increased the precision of many of the Frame_order.test_rigid_data_to_*_model system tests.

This is to fix a test which was failing due to the recent re-parameterisation of the rotor frame
order model to eliminate one parameter. The precision of the numeric Sobol' sequence integration
has been increased by shifting the fixed parameter values even closer to zero. As a consequence,
the chi-squared value of five of these tests is now lower.

2014-05-09 18:25:13 Tree
[r23141] by tlinnet

Made the standard values of chi2 surface be 10, 20, 50 and 90 percentile of all chi2 values.

task #7792: (https://gna.org/task/?7792) Make the dx.map write suggest chi surface values.

2014-05-09 16:57:40 Tree
[r23140] by tlinnet

Added mathematics functions to lib/mathematics.py to calculate percentile.

This is because percentile is only available in numpy 1.9.

task #7792: (https://gna.org/task/?7792) Make the dx.map write suggest chi surface values.

2014-05-09 16:57:38 Tree
[r23139] by tlinnet

Now saves all chi2 values, to better find reasonable chi level for the Innermost, Inner, Middle and Outer Isosurface.

task #7792: (https://gna.org/task/?7792) Make the dx.map write suggest chi surface values.

2014-05-09 16:57:37 Tree
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