relax SVN archive

Fixed systemtest Relax_disp.test_cpmg_synthetic_cr72 and Relax_disp.test_cpmg_synthetic_cr72_full_noise_cluster.

This was after change of the synthetic script.

Changed script for synthetic CPMG data.

This is to test the fitting of CR72 and B14, when creating R2eff data with numerical model:
MODEL_NS_CPMG_2SITE_EXPANDED

This script is ideal for testing cases.
One can readily define experiments settings:
sfrq_X, time_T2_X, ncycs_X for simulating one or more spectrometer eksperiments.

Spins can readily be set up, to have different dynamics, like: r2, r2a, r2b, kex, pA and dw.
The script can test clustering, and can convert to Sherekhan and make a hyper-dimensinal dx map
to test Chi2 hypersurface on parameter settings.

It is also ideal for strees-testing relax, to see if its minimisation algorithm performs well.

sr #3154: (https://gna.org/support/?3154) Implementation of Baldwin (2014) B14 model - 2-site exact solution model for all time scales.

This follows the tutorial for adding relaxation dispersion models at:
http://wiki.nmr-relax.com/Tutorial_for_adding_relaxation_dispersion_models_to_relax#Debugging

Fix for the previous commit.

Fixes for the HTML version of the relax manual.

The renewal of the \theequation command in the model-free and relaxation dispersion chapters was
causing all equation numbers in latex2html to be broken. By placing these in a latexonly
environment, the problem is avoided in the HTML version at www.nmr-relax.com/manual/.

Fix for model B14 full making ugly graphs.

The power of ncyc has to be an integer.

bug #22018 (https://gna.org/bugs/index.php?22018): Model B14 creates ugly graphs ! Sig saw all over the place.

Fix for model B14 mking ugly graphs.

The power of ncyc has to be an integer.

bug #22018 (https://gna.org/bugs/index.php?22018): Model B14 creates ugly graphs ! Sig saw all over the place.

Fix for catastrophic parameter index error for model B14.

The model B14 would get the same parameter index as "B14 full", and would hence optimise wrong parameters.

sr #3154: (https://gna.org/support/?3154) Implementation of Baldwin (2014) B14 model - 2-site exact solution model for all time scales.

This follows the tutorial for adding relaxation dispersion models at:
http://wiki.nmr-relax.com/Tutorial_for_adding_relaxation_dispersion_models_to_relax#Debugging

Better latex2html support for the relax manual, specifically the dispersion software comparison table.

The \yes and \no commands are now better processed as HTML, and the rotating package 'rotate'
environment is replaced by nothing. This will improve the dispersion software comparison table at
http://www.nmr-relax.com/manual/Comparison_dispersion_analysis_software.html.

Speed-up by removing integer to float conversion part.

Reverted r23059 as this was to much commit message.

The command used was:
svn merge -r23059:r23058 .

.....
Speed-up by removing integer to float conversion.

sr #3154: (https://gna.org/support/?3154) Implementation of Baldwin (2014) B14 model - 2-site exact solution model for all time scales.

This follows the tutorial for adding relaxation dispersion models at:
http://wiki.nmr-relax.com/Tutorial_for_adding_relaxation_dispersion_models_to_relax#Debugging
.....