relax SVN archive

Shifted the model-free analysis specific API object to the specific_analyses.model_free.api module.

Merged revisions 22575-22582 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

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r22575 | bugman | 2014-03-28 10:16:53 +0100 (Fri, 28 Mar 2014) | 9 lines

The specific analysis API classes are now all singletons.

This change will reduce the amount of memory used, as these classes are initialised multiple times
throughout relax, especially in the test suite. The API objects are not used for local storage so
the multiple instance verses singleton design change will make no difference. The singleton design
pattern code has been added to the base class specific_analyses.api_base.Api_base so that all
classes inherit the __new__() method which implements the singleton.
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r22576 | bugman | 2014-03-28 10:26:23 +0100 (Fri, 28 Mar 2014) | 3 lines

Shifted the NOE analysis specific user function documentation from the API object to the uf module.
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r22577 | bugman | 2014-03-28 10:56:07 +0100 (Fri, 28 Mar 2014) | 6 lines

More code refactorisation of the specific_analyses.n_state_model package into new modules.

The API object is now in the 'api' module, the remaining private methods have been shifted into the
'optimisation' and 'uf' modules, and the user function documentation moved to the 'uf' module.
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r22578 | bugman | 2014-03-28 11:04:09 +0100 (Fri, 28 Mar 2014) | 3 lines

Added units tests for package consistency testing for all of the remaining specific analyses.
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r22579 | bugman | 2014-03-28 11:04:57 +0100 (Fri, 28 Mar 2014) | 3 lines

Fixes for the unit tests for the N-state model specific analysis package changes.
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r22580 | bugman | 2014-03-28 11:09:43 +0100 (Fri, 28 Mar 2014) | 3 lines

Updated the package __all__ lists for a number of the specific analyses.
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r22581 | bugman | 2014-03-28 11:29:57 +0100 (Fri, 28 Mar 2014) | 5 lines

Shifted all of the private methods for optimisation from the relaxation dispersion API object.

These are now functions of the specific_analyses.relax_disp.optimisation module.
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r22582 | bugman | 2014-03-28 11:52:15 +0100 (Fri, 28 Mar 2014) | 7 lines

Created the new specific_analyses.relax_disp.uf module.

This consists of the private methods of the relaxation dispersion API object which act as the back
end for the user functions, as well as the user function documentation, all shifted from the 'api'
module.
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Created the new specific_analyses.relax_disp.uf module.

This consists of the private methods of the relaxation dispersion API object which act as the back
end for the user functions, as well as the user function documentation, all shifted from the 'api'
module.

Shifted all of the private methods for optimisation from the relaxation dispersion API object.

These are now functions of the specific_analyses.relax_disp.optimisation module.

Updated the package __all__ lists for a number of the specific analyses.

Fixes for the unit tests for the N-state model specific analysis package changes.

Added units tests for package consistency testing for all of the remaining specific analyses.

More code refactorisation of the specific_analyses.n_state_model package into new modules.

The API object is now in the 'api' module, the remaining private methods have been shifted into the
'optimisation' and 'uf' modules, and the user function documentation moved to the 'uf' module.

Shifted the NOE analysis specific user function documentation from the API object to the uf module.

The specific analysis API classes are now all singletons.

This change will reduce the amount of memory used, as these classes are initialised multiple times
throughout relax, especially in the test suite. The API objects are not used for local storage so
the multiple instance verses singleton design change will make no difference. The singleton design
pattern code has been added to the base class specific_analyses.api_base.Api_base so that all
classes inherit the __new__() method which implements the singleton.