relax SVN archive

Changes to the frame_order.pivot user function.

The 'order' argument has been added to allow for multiple pivots to be present. The user function
backend will store these as cdp.pivot, cdp.pivot2, cdp.pivot3, etc. The 'fix' argument is now
defaulting to False to make sure it is always boolean.

Updated the CaM frame order double rotor system test script to have the correct two pivots.

Changed the handling of the pivot point in the CaM frame order system tests.

The pivot point is now a class variable, rather than being hardcoded into a function. The handling
of a second pivot has also been added.

Updated the test_suite.system_tests.scripts.frame_order.cam package __all__ list.

Class variable cleanup for the CaM frame order system test scripts.

The variables are now all defined in the base script and only overwritten when needed by the
individual tests.

Capitalised the class variables of all of the CaM frame order system test scripts.

Added a simple script for analysing the Eigensystem of the CaM frame order double rotor test model.

Import fix for the changes to the specific_analyses.frame_order package layout.

Merged revisions 22165-22166 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

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r22165 | bugman | 2014-02-10 10:37:53 +0100 (Mon, 10 Feb 2014) | 9 lines

Created the Mf.test_bug_21615_incomplete_setup_failure GUI tests.

This is designed to catch bug #21615 (https://gna.org/bugs/?21615) as reported by Ivan Leung
(ivanhoe dott leung att chem dott ox dot ac dot uk).

Included are the data files Ivan attached to the bug report truncated to two residues. The GUI test
follows exactly the steps outlined by Ivan.
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r22166 | bugman | 2014-02-10 10:43:46 +0100 (Mon, 10 Feb 2014) | 10 lines

Fix for bug #21615, the missing data dialog failure when executing the GUI model-free analysis.

This is the bug at https://gna.org/bugs/?21615 as reported by Ivan Leung (ivanhoe dott leung att
chem dott ox dot ac dot uk).

The problem is that the spin container's "isotope" variable is being accessed directly after a test
showing that this variable does not exist. This is now fixed so that the missing data dialog is now
presented explaining that the spin isotope information is not set.
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Merged revisions 22155-22164 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

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r22155 | bugman | 2014-02-07 17:03:36 +0100 (Fri, 07 Feb 2014) | 7 lines

Loosened the checks of some of the Relax_fit system tests.

These are the Relax_fit.test_curve_fitting_height and Relax_fit.test_curve_fitting_volume system
tests. The minor change is required to allow the tests to pass on a 32-bit system with Python
3.3.3.
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r22156 | bugman | 2014-02-07 17:46:05 +0100 (Fri, 07 Feb 2014) | 5 lines

The python_seek.py development script now allows the modules to be specified on the command line.

This speeds up the script and allows individual modules to be checked and the version displayed.
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r22157 | bugman | 2014-02-07 17:48:28 +0100 (Fri, 07 Feb 2014) | 6 lines

Added a copyright notice to the python_seek.py script.

The descriptive text has also been converted into a docstring. The copyright is simply to show who
wrote the script and how old it is.
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r22158 | bugman | 2014-02-07 17:54:29 +0100 (Fri, 07 Feb 2014) | 3 lines

The python_seek.py script can now check for the ancient Numeric module.

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r22159 | bugman | 2014-02-07 17:55:41 +0100 (Fri, 07 Feb 2014) | 3 lines

The python_seek.py script can now check for the ancient Scientific module.
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r22160 | bugman | 2014-02-07 18:14:41 +0100 (Fri, 07 Feb 2014) | 3 lines

The python_seek.py now lists the Python version again (broken in the last few commits).
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r22161 | bugman | 2014-02-07 18:18:06 +0100 (Fri, 07 Feb 2014) | 3 lines

The python_seek.py script now accepts the 'all' argument to display all modules supported by the script.
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r22162 | bugman | 2014-02-07 18:20:06 +0100 (Fri, 07 Feb 2014) | 3 lines

Output formatting improvements for the python_seek.py development script.
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r22163 | bugman | 2014-02-07 18:47:33 +0100 (Fri, 07 Feb 2014) | 3 lines

Changed the module ordering in the python_seek.py development script.
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r22164 | bugman | 2014-02-10 08:24:11 +0100 (Mon, 10 Feb 2014) | 3 lines

Epydoc docstring fix for the pipe_control.structure.main.load_spins() function.
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