relax SVN archive

Fixes for all of the Relax_disp system tests which use Flemming Hansen's CPMG data.

These are needed due to the improved error estimates in the data files.

Fixes for the Relax_disp.test_hansen_cpmg_data_auto_analysis* system tests.

The Relax_disp.test_hansen_cpmg_data_auto_analysis system test needed updating due to the more
accurate R2eff errors. The Relax_disp.test_hansen_cpmg_data_auto_analysis_r2eff system test also
needed this change. It also no longer has a spin system for residue 4.

Fix for return_index_from_disp_point() for when R2eff/R1rho data is loaded rather than intensities.

This specific_analyses.relax_disp.disp_data.return_index_from_disp_point() function was always
subtracting 1 from the dispersion point index to take the reference spectrum into account. This
however fails if R2eff/R1rho data is loaded instead.

Improved the R2eff errors for Flemming Hansen's CPMG data.

The errors are now calculated using the data from all spins rather than a truncated subset. The
errors will therefore be much more accurate.

Missing imports.

Fixes for the Monte Carlo simulations in the dispersion analysis when R2eff data has been read.

As peak intensity data has not been read, the relaxation time period will not have been set. The
_back_calc_r2eff() method can now handle this.

The relax_disp.insignificance user function can now handle selected spins with no R2eff/R1rho data.

Reverted r21312 as for the system tests the truncated data is much quicker to optimise.

The command used was:
svn merge -r21312:r21311 .

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r21312 | bugman | 2013-10-29 13:57:57 +0100 (Tue, 29 Oct 2013) | 3 lines
Changed paths:
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/generate_r2eff_files.log
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/generate_r2eff_files.py
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/500_1000.00.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/500_133.33.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/500_200.00.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/500_266.67.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/500_333.33.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/500_400.00.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/500_466.67.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/500_533.33.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/500_600.00.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/500_66.67.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/500_666.67.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/500_733.33.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/500_800.00.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/500_866.67.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/500_933.33.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/800_1000.00.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/800_133.33.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/800_200.00.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/800_266.67.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/800_333.33.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/800_400.00.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/800_466.67.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/800_533.33.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/800_600.00.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/800_66.67.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/800_666.67.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/800_733.33.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/800_800.00.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/800_866.67.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/800_933.33.r2eff

Updated the R2eff data files of Flemming Hansen's CPMG data to include all spins.
.....

Some small fixes to allow the optimisation of dispersion models when no peak intensity data has been read.

This is for when R2eff data has been read instead.

Fixes for the Relax_disp.test_hansen_cpmg_data_auto_analysis system test for the changes of r21313.

The setup of the auto-analysis could be simplified as the base data pipe can now contain R2eff data.
The R2eff data in the 'R2eff' data pipe was no longer being read.