relax SVN archive

Fixes for the Monte Carlo simulations in the dispersion analysis when R2eff data has been read.

As peak intensity data has not been read, the relaxation time period will not have been set. The
_back_calc_r2eff() method can now handle this.

The relax_disp.insignificance user function can now handle selected spins with no R2eff/R1rho data.

Reverted r21312 as for the system tests the truncated data is much quicker to optimise.

The command used was:
svn merge -r21312:r21311 .

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r21312 | bugman | 2013-10-29 13:57:57 +0100 (Tue, 29 Oct 2013) | 3 lines
Changed paths:
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/generate_r2eff_files.log
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/generate_r2eff_files.py
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/500_1000.00.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/500_133.33.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/500_200.00.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/500_266.67.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/500_333.33.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/500_400.00.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/500_466.67.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/500_533.33.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/500_600.00.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/500_66.67.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/500_666.67.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/500_733.33.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/500_800.00.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/500_866.67.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/500_933.33.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/800_1000.00.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/800_133.33.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/800_200.00.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/800_266.67.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/800_333.33.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/800_400.00.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/800_466.67.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/800_533.33.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/800_600.00.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/800_66.67.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/800_666.67.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/800_733.33.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/800_800.00.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/800_866.67.r2eff
M /branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_data/800_933.33.r2eff

Updated the R2eff data files of Flemming Hansen's CPMG data to include all spins.
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Some small fixes to allow the optimisation of dispersion models when no peak intensity data has been read.

This is for when R2eff data has been read instead.

Fixes for the Relax_disp.test_hansen_cpmg_data_auto_analysis system test for the changes of r21313.

The setup of the auto-analysis could be simplified as the base data pipe can now contain R2eff data.
The R2eff data in the 'R2eff' data pipe was no longer being read.

Fixes for the dispersion specific overfit_deselect() method for when R2eff data is read.

This now no longer checks for intensity data but rather R2eff data, as intensity data will not be
present if R2eff data is directly read rather than peak intensities.

Fix for the dispersion auto-analysis if R2eff data already exists.

The data is no longer copied from the non-existent 'R2eff' data pipe.

Updated the R2eff data files of Flemming Hansen's CPMG data to include all spins.

The relax_disp.r2eff_read user function now prints out all the data which has been read.

This feedback is useful for the user to know what has or has not been read into relax.

The specific_analyses.relax_disp.disp_data.loop_time() function can now handle no relaxation times being set.