relax SVN archive

Added a printout for the pre-set dispersion parameter skipping in grid search.

Changed the operation of the grid search for the relaxation dispersion analysis.

If a parameter is a simple floating number type and it already has a value, then the grid search
over that dimension is fixed. The grid increments are set to 1, and the upper and lower bounds set
to the parameter value. This allows parameters to be pre-set, if known from experiment. They will
nevertheless be optimised via the minimise user function.

Merged revisions 21089 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

........
r21089 | bugman | 2013-10-14 14:16:28 +0200 (Mon, 14 Oct 2013) | 6 lines

Bug fix for the specific analysis API _data_init_spin() method.

This is used for the API init_spin() method. This is a latent bug which does not affect any of the
current analyses in relax. It was discovered in the relaxation dispersion branch.
........

Bug fix for the specific analysis API _data_init_spin() method.

This is used for the API init_spin() method. This is a latent bug which does not affect any of the
current analyses in relax. It was discovered in the relaxation dispersion branch.

Added some value.set calls to the Relax_disp.test_sprangers_cpmg_data_auto_analysis system test.

These user function calls will be used to test a new concept of fixing parameters in the grid
search. The dw and dwH parameters are fixed to the experimental values, as described in the README
file from Remco Sprangers (in test_suite/shared_data/dispersion/Sprangers_ClpP).

Added some value.set user function calls to the script for Sprangers' ClpP data.

Speed ups for the Relax_disp.test_sprangers_cpmg_data_auto_analysis system test.

This test does not pass yet, but this should allow the test to complete in under an hour.

Fix for a bug in the specific_analyses.relax_disp.disp_data.loop_point() function introduced at r21060.

Docstring fix for the lib.dispersion.mq_ns_cpmg_2site.populate_matrix() function.

Fixed some bad referencing in the dispersion chapter of the manual.