relax SVN archive

Added some more arguments to the dispersion target function class for off-resonance R1rho models.

This is the structure for the spin-lock offsets and the tilt angles for each spin.

Reverted r20681 as the chemical shift conversion is better performed by the specific analysis code.

The command used was:
svn merge -r20681:r20680 .

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r20681 | bugman | 2013-08-23 16:59:16 +0200 (Fri, 23 Aug 2013) | 6 lines
Changed paths:
M /branches/relax_disp/target_functions/relax_disp.py

Changed how chemical shifts are handled in the dispersion target function class.

The chemical shifts in ppm are accepted and they are converted to rad/s inside the __init__()
method. A structure for rotating frame tilt angles is now also accepted.
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Fix for the relax_disp.spin_lock_offset user function.

The cdp.dispersion_points structure was being updated when it should not be touched - a remnant of
the relax_disp.spin_lock_field backend which this code was copied from.

Fixed a typo in the dispersion chapter of the user manual.

This was identified by Troels Linnet at http://thread.gmane.org/gmane.science.nmr.relax.devel/4410.

The offset is now set for all spectra in the Relax_disp.test_r1rho_off_res_fixed_time_tp02 system test.

Previously only the reference was set.

Implemented the relax_disp.spin_lock_offset user function.

This includes both the front end and the back end
specific_analyses.relax_disp.disp_data.spin_lock_offset() function.

Added a relax_disp.spin_lock_offset user function call to Relax_disp.test_r1rho_off_res_tp02.

This is the Relax_disp.test_r1rho_off_res_tp02 system test and the user function does not exist yet.

Merged revisions 20682-20684 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

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r20682 | bugman | 2013-08-26 09:43:18 +0200 (Mon, 26 Aug 2013) | 8 lines

Updated the nmrPipe processing script in the relax user manual.

This is in response to the post by Troels Linnet at
http://thread.gmane.org/gmane.science.nmr.relax.user/1520.

The text has also been expanded to better explain spectral processing.
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r20683 | bugman | 2013-08-26 10:47:08 +0200 (Mon, 26 Aug 2013) | 3 lines

Improvements for the description of the NMRPipe processing script in the R1/R2 chapter of the user manual.
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r20684 | bugman | 2013-08-26 11:01:16 +0200 (Mon, 26 Aug 2013) | 3 lines

LaTeX fix for the curvefit chapter of the user manual.
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LaTeX fix for the curvefit chapter of the user manual.

Improvements for the description of the NMRPipe processing script in the R1/R2 chapter of the user manual.