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Merged revisions 20590-20596 via svnmerge from

svn+ssh://bugman@.../svn/relax/trunk

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r20590 | bugman | 2013-08-14 16:48:43 +0200 (Wed, 14 Aug 2013) | 8 lines

Reverted r20587 and r20588 as these were rubbish!

The command used was:
svn merge -rHEAD:r20586 .

There are gcc verses pdf Modelfree4 binary results for version 4.20.
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r20591 | bugman | 2013-08-14 18:19:38 +0200 (Wed, 14 Aug 2013) | 6 lines

Proper fix for the Palmer.test_palmer_omp for the different Modelfree4 binaries.

The gcc and pdf binaries are now properly detected and the slightly different results are now
correctly checked for.
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r20592 | bugman | 2013-08-14 18:53:13 +0200 (Wed, 14 Aug 2013) | 3 lines

Updated the Mac Framework setup document to help with scipy compilation problems.
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r20593 | bugman | 2013-08-14 18:54:19 +0200 (Wed, 14 Aug 2013) | 5 lines

Improved the Python seeking and module version print out script for symlinks.

This should now be much more capable of finding all Python versions on a system.
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r20594 | bugman | 2013-08-14 19:52:39 +0200 (Wed, 14 Aug 2013) | 8 lines

Added support for the Mac OS X Modelfree4 binary results to the Palmer.* system tests.

The Mac OS X Modelfree 4.20 binary produces different results than the Linux binaries, mainly due to
a compilation problem. In the Linux binaries, the results are written out to 4 decimal places. In
the Mac binaries, the results are instead written out to 4 significant figures. Therefore the
number of decimal places are much less than the Linux results.
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r20595 | bugman | 2013-08-14 19:55:57 +0200 (Wed, 14 Aug 2013) | 5 lines

Fix for the Palmer.test_palmer system test for older Python versions.

This is a problem introduced in the previous commit (r20594).
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r20596 | bugman | 2013-08-15 09:10:12 +0200 (Thu, 15 Aug 2013) | 24 lines

Syntax error fix for one of the unused scripts in the relax test suite shared data directories.

This problem was encountered by Jack Howarth <howarth att bromo dott med dott uc dott edu> and
communicated in a private message. The issue was found by fink. This script is never used and will
never be used again - it is only there for reference. How a syntax error was introduced is a
mystery. For reference, the full message is:

"""
While preparing fink packaging for the new relax 3.0.0 release, I noticed an error
in the python scripts. When installing relax-py27-3.0.0, I get the following error as
the the frame_order_pseudo_ellipse.py python script is compiled. What is the correct
syntax for that particular call to pymol.command?

Setting up relax-py27 (3.0.0-1) ...
Compiling /sw/lib/relax-py27/test_suite/shared_data/frame_order/cam/pseudo_ellipse_free_rotor/frame_order_pseudo_ellipse.py ...
File "/sw/lib/relax-py27/test_suite/shared_data/frame_order/cam/pseudo_ellipse_free_rotor/frame_order_pseudo_ellipse.py", line 154
pymol.command('show spheres'_pseudo_ellipse)
^
SyntaxError: invalid syntax

Thanks in advance for any clarification.
"""
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bugman 2013-08-15

changed /branches/peak_intensities
changed /branches/peak_intensities/devel_scripts/python_seek.py
changed /branches/peak_intensities/docs/Mac_framework_build_3way
changed /branches/peak_intensities/test_suite/shared_data/frame_order/cam/pseudo_ellipse_free_rotor/frame_order_pseudo_ellipse.py
changed /branches/peak_intensities/test_suite/system_tests/palmer.py
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