relax SVN archive

An attempt at better handling MS Windows not releasing the file handle on time in the test suite.

The system and unit tests tearDown() method should now be resilient to the strange MS Windows
behaviour of not releasing the relax state files. The tearDown() method should now complete even
when this error occurs. A delay of 3 seconds has been added when the WindowsError occurs to give
the OS some time before attempting to delete the file again. If this fails, then the file deletion
operation is skipped.

Started to create the Relax_disp.test_r1rho_off_res_fixed_time_tp02 system test.

Updated the TP02 R1rho model conditions in the table in the manual.

This cannot be fast exchange.

Updated the M61 R1rho model conditions in the table in the user manual.

Modified the synthetic data for the TP02 dispersion model.

The data is more closely mimics that from the paper, and should now be in the slow exchange regime.

Created the synthetic data for the TP02 dispersion model.

The Sparky peak lists have been created and added to the repository.

Python 3 fix for the lib.software.nmrpipe.read_list_intensity_seriestab() function.

The inbuilt Python filter() function does not return a list in Python 3, as previously, but rather
a filter object. Therefore a call to list() is required to properly convert the data.

Merged revisions 20534 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

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r20534 | bugman | 2013-08-05 16:19:13 +0200 (Mon, 05 Aug 2013) | 3 lines

Lots of spelling fixes for the relax user manual.
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Lots of spelling fixes for the relax user manual.

Merged revisions 20525-20532 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

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r20525 | bugman | 2013-08-04 14:34:35 +0200 (Sun, 04 Aug 2013) | 6 lines

The relax user manual is now broken into parts.

The higher level LaTeX part command is now used to group related chapters. This should make it
easier for users to navigate this huge thing.
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r20526 | bugman | 2013-08-04 20:06:05 +0200 (Sun, 04 Aug 2013) | 9 lines

Creation of the optimisation chapter of the relax user manual.

The main text of this chapter originates as part of the model-free chapter. As this most of this
text was not model-free specific, it has been spun out as its own chapter. Text has also been taken
from the "Optimisation of relaxation data – values, gradients, and Hessians" chapter.

The indexing for the optimisation topics has also been improved.
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r20527 | bugman | 2013-08-04 20:07:44 +0200 (Sun, 04 Aug 2013) | 5 lines

Changed the chapter layout of the relax user manual.

The development chapter has been moved forwards.
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r20528 | bugman | 2013-08-04 21:37:50 +0200 (Sun, 04 Aug 2013) | 6 lines

Fix for the spectrum.read_intensities user function docstring.

Grammatically, the text "spectrum ID's" should be "spectrum IDs". The problem though was that this
text was strangely causing the user manual compilation to fail.
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r20529 | bugman | 2013-08-04 21:45:06 +0200 (Sun, 04 Aug 2013) | 3 lines

Added subsubindexing for the optimisation algorithm index entries.
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r20530 | bugman | 2013-08-04 22:11:28 +0200 (Sun, 04 Aug 2013) | 3 lines

Added extensive cross-referencing to the index of the relax user manual.
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r20531 | bugman | 2013-08-04 22:43:00 +0200 (Sun, 04 Aug 2013) | 5 lines

Added some hyphenation rules for better formatting in the user manual.

For this, the external hyphenation.tex has been created.
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r20532 | bugman | 2013-08-04 23:40:15 +0200 (Sun, 04 Aug 2013) | 5 lines

Better indexing in the relax user manual.

The imakeidx LaTeX package is now used instead of makeidx, and the hyphenation has been improved.
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