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SVN archive Commit Log


Commit Date  
[r20306] by bugman

Docstring completion for lib.dispersion.ns_2site_star.r2eff_ns_2site_star().

Epydoc text was missing for some of the function arguments.

2013-07-15 17:07:57 Tree
[r20305] by bugman

Improvement of the error handling in the 'NS 2-site star' model.

The fA and pB parameters are no longer being checked. Instead a Mgx value of 0.0 is being checked
for. This catches additional problems. And now instead of the R2eff value being set to zero, it is
set to 1e99. This is because log of zero is -inf, and then multiplied by a negative constant gives
positive inf.

2013-07-15 17:04:29 Tree
[r20304] by bugman

More speed ups of the 'NS 2-site star' dispersion model.

A number of calculations have been shifted to the target function initialisation code, avoiding
unnecessary repetitive mathematical operations.

2013-07-15 16:35:02 Tree
[r20303] by bugman

Shifted to using the faster numpy.linalg.matrix_power() function in lib.dispersion.ns_2site_star.

This was originally using the lib.linear_algebra.matrix_power.square_matrix_power() function,
however the numpy equivalent is faster.

2013-07-15 16:16:46 Tree
[r20302] by bugman

Speed ups of the 'NS 2-site star' dispersion model optimisation.

The relaxation and magnitisation data structures are now initialised with the target function
initialisation, rather than being created at each target function call. The Rex and M0 matrices are
now updated at the base of the target function rather than in the lib.dispersion.ns_2site_star
module to minimise the number of mathematical operations per target function call. And the M0
matrix has changed shape and a dot product is used in lib.dispersion.ns_2site_star to create Moft
instead.

2013-07-15 16:13:21 Tree
[r20301] by bugman

The 'NS 2-site star' model is now more robust against math domain failures.

This includes the failure of the logarithmic of zero matrices.

2013-07-15 15:08:50 Tree
[r20300] by bugman

Fix for the state G+E to A+B conversion in lib.dispersion.ns_2site_star.

2013-07-15 11:55:12 Tree
[r20299] by bugman

The fixed relaxation time period is now sent into the 'NS 2-site star' dispersion model.

2013-07-15 10:03:38 Tree
[r20298] by bugman

Basic fix for the lib.linear_algebra.matrix_power.square_matrix_power() function.

2013-07-15 09:57:31 Tree
[r20297] by bugman

The chemical shift difference is now passed into lib.dispersion.ns_2site_star.

This is currently set to the fA parameter, though it is not yet clear if this is correct.

2013-07-15 09:46:41 Tree
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