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[r20257] by bugman

Imported the missing lib.software.nmrpipe module into pipe_control.spectrum.

Progress sr #3043: (https://gna.org/support/index.php?3043) - Support for NMRPipe seriesTab format
*.ser.

Expected modules for use in lib\software\nmrpipe.py is imported.

2013-06-24 12:58:23 Tree
[r20256] by bugman

Added function destination for auto-detected NMRPipe SeriesTab format.

Progress sr #3043: (https://gna.org/support/index.php?3043) - Support for NMRPipe seriesTab format
*.ser.

Auto-detected NMRPipe SeriesTab format make function calls to the file: lib\software\nmrpipe.py in
function nmrpipe.read_list_intensity_seriestab().

2013-06-24 10:29:40 Tree
[r20255] by bugman

The prompt examples in the user function chapter of the manual now use the listing environment.

This is via the fetch_docstrings.py script and results in much better formatting of these
subsections.

2013-06-21 22:45:10 Tree
[r20254] by bugman

Converted all relax prompt examples in the intro chapter of the manual to the lstlisting environment.

This is simply for a more colourful representation.

2013-06-21 21:40:55 Tree
[r20253] by bugman

The relax prompt strings and help system are now keywords for the relax listings package definition.

The prompt strings "relax>" and "relax|" are now recognised as keywords and are coloured blue. The
help system has been added as a normal Python keyword for highlighting.

2013-06-21 20:48:44 Tree
[r20252] by bugman

Update of the rotation matrix example in the intro chapter of the user manual.

The function is now in lib.geometry.rotations.euler_to_R_zyz(). The example has also been converted
to the lstlisting environment for better formatting.

2013-06-21 20:26:18 Tree
[r20251] by bugman

Autodetect format implemented for NMRPipe SeriesTab format implemented.

Progress sr #3043: (https://gna.org/support/index.php?3043) - Support for NMRPipe seriesTab format
*.ser.

The file is determined a NMRPipe SeriesTab if the first two words of the first line is: REMARK
SeriesTab.

2013-06-21 18:01:06 Tree
[r20250] by bugman

Fix for commit (http://article.gmane.org/gmane.science.nmr.relax.scm/18004). The spin naming was wrong.

Progress sr #3043: (https://gna.org/support/index.php?3043) - Support for NMRPipe seriesTab format
*.ser.

The spin naming was wrong. 'spin_id' keywords should be supplied different. Ex:
spin.name(name='NE1', spin_id=':62').

2013-06-21 17:46:58 Tree
[r20249] by bugman

Adding a NMRPipe function file in the folder lib\software\nmrpipe.py.

Progress sr #3043: (https://gna.org/support/index.php?3043) - Support for NMRPipe seriesTab format
*.ser.

Initial file for: lib\software\nmrpipe.py. This file will hold the function calls handling NMRPipe
SeriesTab format.

2013-06-21 16:33:03 Tree
[r20248] by bugman

Test function for NMRPipe SeriesTab format implemented.

Progress sr #3043: (https://gna.org/support/index.php?3043) - Support for NMRPipe seriesTab format
*.ser.

An assertEqual test is implemented for the reading of NMRPipe SeriesTab format. The standalone call
is: relax -s Peak_lists.test_read_peak_list_NMRPipe_seriesTab

2013-06-21 16:23:24 Tree
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