relax SVN archive

Merged revisions 19289 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

........
r19289 | bugman | 2013-04-02 11:08:27 +0200 (Tue, 02 Apr 2013) | 21 lines

Manually ported r19283 from the 2.2 development line to trunk.

The command used was:
svn merge -r19283:19284 svn+ssh://bugman@.../svn/relax/branches/2.2 .

.....
r19284 | bugman | 2013-04-02 11:02:34 +0200 (Tue, 02 Apr 2013) | 10 lines
Changed paths:
M /branches/2.2/specific_analyses/consistency_tests.py

Fix for bug #20674 (https://gna.org/bugs/?20674) - the failure of the consistency testing analysis.

This was reported by Mengjun Xue <mengjun dott xue att mailbox dott tu-berlin dot de>.

The problem was that the first residue did not have a single proton 'H' in the PDB file, and
therefore the dipolar relaxation interaction was not set up. The overfit_deselect() method of the
consistency testing specific API was not checking for this. The method is now much more like that
of the model-free specific analysis.
.....
........

Manually ported r19283 from the 2.2 development line to trunk.

The command used was:
svn merge -r19283:19284 svn+ssh://bugman@.../svn/relax/branches/2.2 .

.....
r19284 | bugman | 2013-04-02 11:02:34 +0200 (Tue, 02 Apr 2013) | 10 lines
Changed paths:
M /branches/2.2/specific_analyses/consistency_tests.py

Fix for bug #20674 (https://gna.org/bugs/?20674) - the failure of the consistency testing analysis.

This was reported by Mengjun Xue <mengjun dott xue att mailbox dott tu-berlin dot de>.

The problem was that the first residue did not have a single proton 'H' in the PDB file, and
therefore the dipolar relaxation interaction was not set up. The overfit_deselect() method of the
consistency testing specific API was not checking for this. The method is now much more like that
of the model-free specific analysis.
.....

Merged revisions 19286 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

........
r19286 | bugman | 2013-04-02 11:06:35 +0200 (Tue, 02 Apr 2013) | 14 lines

Manually merged r19282 from the 2.2 development line to trunk.

The command used was:
svn merge -r19282:19283 svn+ssh://bugman@.../svn/relax/branches/2.2 .

.....
r19283 | bugman | 2013-04-02 10:58:10 +0200 (Tue, 02 Apr 2013) | 3 lines
Changed paths:
M /branches/2.2/test_suite/system_tests/scripts/bug_20674_ct_analysis_failure.py

Decreased the number of Monte Carlo simulations in the Ct.test_bug_20674_ct_analysis_failure system test.
.....
........

Merged revisions 19285 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

........
r19285 | bugman | 2013-04-02 11:05:27 +0200 (Tue, 02 Apr 2013) | 24 lines

Manually merged r19282 from the 2.2 development line to trunk.

The command used was:
svn merge -r19281:19282 svn+ssh://bugman@.../svn/relax/branches/2.2 .

.....
r19282 | bugman | 2013-04-02 10:47:26 +0200 (Tue, 02 Apr 2013) | 6 lines
Changed paths:
A /branches/2.2/test_suite/shared_data/consistency_testing
A /branches/2.2/test_suite/shared_data/consistency_testing/bug_20674_ct_analysis_failure
A /branches/2.2/test_suite/shared_data/consistency_testing/bug_20674_ct_analysis_failure/2QFK_MONOMERHabc5.pdb
A /branches/2.2/test_suite/shared_data/consistency_testing/bug_20674_ct_analysis_failure/NOE dhp 700.txt
A /branches/2.2/test_suite/shared_data/consistency_testing/bug_20674_ct_analysis_failure/T1 dhp 700.txt
A /branches/2.2/test_suite/shared_data/consistency_testing/bug_20674_ct_analysis_failure/T2 dhp 700.txt
M /branches/2.2/test_suite/system_tests/consistency_tests.py
A /branches/2.2/test_suite/system_tests/scripts/bug_20674_ct_analysis_failure.py

Created the Ct.test_bug_20674_ct_analysis_failure system test for catching bug #20674.

This was reported by Mengjun Xue <mengjun dott xue att mailbox dott tu-berlin dot de> at
https://gna.org/bugs/?20674.
.....
........

Manually merged r19282 from the 2.2 development line to trunk.

The command used was:
svn merge -r19282:19283 svn+ssh://bugman@.../svn/relax/branches/2.2 .

.....
r19283 | bugman | 2013-04-02 10:58:10 +0200 (Tue, 02 Apr 2013) | 3 lines
Changed paths:
M /branches/2.2/test_suite/system_tests/scripts/bug_20674_ct_analysis_failure.py

Decreased the number of Monte Carlo simulations in the Ct.test_bug_20674_ct_analysis_failure system test.
.....

Manually merged r19282 from the 2.2 development line to trunk.

The command used was:
svn merge -r19281:19282 svn+ssh://bugman@.../svn/relax/branches/2.2 .

.....
r19282 | bugman | 2013-04-02 10:47:26 +0200 (Tue, 02 Apr 2013) | 6 lines
Changed paths:
A /branches/2.2/test_suite/shared_data/consistency_testing
A /branches/2.2/test_suite/shared_data/consistency_testing/bug_20674_ct_analysis_failure
A /branches/2.2/test_suite/shared_data/consistency_testing/bug_20674_ct_analysis_failure/2QFK_MONOMERHabc5.pdb
A /branches/2.2/test_suite/shared_data/consistency_testing/bug_20674_ct_analysis_failure/NOE dhp 700.txt
A /branches/2.2/test_suite/shared_data/consistency_testing/bug_20674_ct_analysis_failure/T1 dhp 700.txt
A /branches/2.2/test_suite/shared_data/consistency_testing/bug_20674_ct_analysis_failure/T2 dhp 700.txt
M /branches/2.2/test_suite/system_tests/consistency_tests.py
A /branches/2.2/test_suite/system_tests/scripts/bug_20674_ct_analysis_failure.py

Created the Ct.test_bug_20674_ct_analysis_failure system test for catching bug #20674.

This was reported by Mengjun Xue <mengjun dott xue att mailbox dott tu-berlin dot de> at
https://gna.org/bugs/?20674.
.....

Fix for bug #20674 (https://gna.org/bugs/?20674) - the failure of the consistency testing analysis.

This was reported by Mengjun Xue <mengjun dott xue att mailbox dott tu-berlin dot de>.

The problem was that the first residue did not have a single proton 'H' in the PDB file, and
therefore the dipolar relaxation interaction was not set up. The overfit_deselect() method of the
consistency testing specific API was not checking for this. The method is now much more like that
of the model-free specific analysis.

Decreased the number of Monte Carlo simulations in the Ct.test_bug_20674_ct_analysis_failure system test.

Created the Ct.test_bug_20674_ct_analysis_failure system test for catching bug #20674.

This was reported by Mengjun Xue <mengjun dott xue att mailbox dott tu-berlin dot de> at
https://gna.org/bugs/?20674.

Creation of a branch for the continuation of the 2.2 line development.

The command used was:
svn cp -F svn_msg svn+ssh://bugman@.../svn/relax/trunk@r19099 svn+ssh://bugman@.../svn/relax/branches/2.2/