relax SVN archive

Ported r8363 from the old relax_disp branch into the new branch.

The command used was:
svn merge -r8362:8363 svn+ssh://bugman@.../svn/relax/branches/relax_disp@r18123 .

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r8363 | semor | 2009-01-10 21:50:01 +0100 (Sat, 10 Jan 2009) | 4 lines
Changed paths:
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/1000.in_sparky
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/133.33.in.bis_sparky
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/133.33.in_sparky
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/200.in_sparky
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/266.67.in_sparky
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/333.33.in_sparky
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/400.in_sparky
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/466.67.in_sparky
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/533.33.in.bis_sparky
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/533.33.in_sparky
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/600.in_sparky
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/66.667.in_sparky
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/666.67.in_sparky
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/733.33.in_sparky
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/800.in_sparky
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/866.67.in_sparky
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/933.33.in.bis_sparky
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/933.33.in_sparky
M /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/readme
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/reference.in_sparky
M /branches/relax_disp/test_suite/system_tests/scripts/relax_disp_cpmg_fast.py

Added 'Sparky' formatted files to the system-test so the files can be input and development of the
branch continued.
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Ported r8362 from the old relax_disp branch into the new branch.

The command used was:
svn merge -r8361:8362 svn+ssh://bugman@.../svn/relax/branches/relax_disp@r18123 .

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r8362 | semor | 2009-01-10 21:09:49 +0100 (Sat, 10 Jan 2009) | 11 lines
Changed paths:
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/1000.in
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/133.33.in
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/133.33.in.bis
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/200.in
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/266.67.in
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/333.33.in
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/400.in
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/466.67.in
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/533.33.in
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/533.33.in.bis
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/600.in
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/66.667.in
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/666.67.in
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/733.33.in
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/800.in
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/866.67.in
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/933.33.in
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/933.33.in.bis
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/fake_sequence.in
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/readme
A /branches/relax_disp/test_suite/shared_data/curve_fitting_disp/dataset_1/reference.in
M /branches/relax_disp/test_suite/system_tests/scripts/relax_disp_cpmg_fast.py

Added a relaxation dispersion dataset in the system-test.

This was kindly provided by Dr Flemming Hansen (flemming AT pound DOT med DOT utoronto DOT ca) and
was previously published in: Hansen, Vallurupalli & Kay, 2008, JPhysChemB, 112: 5898-5904.

The original format was different and was modified to better suit the way relax handles datasets.

Finally, the information contained here were written in a 'readme' file placed in the same
directory as the dataset itself to allow referencing and acknowledgments.
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Ported r8361 from the old relax_disp branch into the new branch.

The command used was:
svn merge -r8360:8361 svn+ssh://bugman@.../svn/relax/branches/relax_disp/specific_fns/@r18123 specific_analyses

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r8361 | semor | 2009-01-10 17:56:56 +0100 (Sat, 10 Jan 2009) | 3 lines
Changed paths:
M /branches/relax_disp/specific_fns/relax_disp.py

Changed the default cpmg_frq value in cpmg_frq() from 0 to None.
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Ported r8360 from the old relax_disp branch into the new branch.

The command used was:
svn merge -r8359:8360 svn+ssh://bugman@.../svn/relax/branches/relax_disp/specific_fns/@r18123 specific_analyses

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r8360 | semor | 2009-01-10 17:48:17 +0100 (Sat, 10 Jan 2009) | 3 lines
Changed paths:
M /branches/relax_disp/specific_fns/relax_disp.py

Corrected a few dosctrings.
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Ported r8359 from the old relax_disp branch into the new branch.

The command used was:
svn merge -r8358:8359 svn+ssh://bugman@.../svn/relax/branches/relax_disp/specific_fns/@r18123 specific_analyses

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r8359 | semor | 2009-01-10 17:32:59 +0100 (Sat, 10 Jan 2009) | 3 lines
Changed paths:
M /branches/relax_disp/specific_fns/relax_disp.py

Corrected some print outs...
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Ported r8358 from the old relax_disp branch into the new branch.

The command used was:
svn merge -r8357:8358 svn+ssh://bugman@.../svn/relax/branches/relax_disp/specific_fns/@r18123 specific_analyses

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r8358 | semor | 2009-01-10 16:51:19 +0100 (Sat, 10 Jan 2009) | 3 lines
Changed paths:
M /branches/relax_disp/specific_fns/relax_disp.py

Introduced relaxation dispersion parameters in the function return_data_name().
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Ported r8357 from the old relax_disp branch into the new branch.

The command used was:
svn merge -r8356:8357 svn+ssh://bugman@.../svn/relax/branches/relax_disp/specific_fns/@r18123 specific_analyses

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r8357 | semor | 2009-01-10 02:45:29 +0100 (Sat, 10 Jan 2009) | 3 lines
Changed paths:
M /branches/relax_disp/specific_fns/relax_disp.py

Introduced CPMG parameters into the function return_grace_string() and corrected formatting issues.
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Ported r8355 from the old relax_disp branch into the new branch.

The command used was:
svn merge -r8354:8355 svn+ssh://bugman@.../svn/relax/branches/relax_disp/specific_fns/@r18123 specific_analyses

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r8355 | semor | 2009-01-10 02:16:00 +0100 (Sat, 10 Jan 2009) | 3 lines
Changed paths:
M /branches/relax_disp/specific_fns/relax_disp.py

A bit more changes to introduce parameters for CPMG relaxation dispersion.
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Ported r8354 from the old relax_disp branch into the new branch.

The command used was:
svn merge -r8353:8354 svn+ssh://bugman@.../svn/relax/branches/relax_disp/specific_fns/@r18123 specific_analyses

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r8354 | semor | 2009-01-09 23:13:27 +0100 (Fri, 09 Jan 2009) | 7 lines
Changed paths:
M /branches/relax_disp/specific_fns/relax_disp.py

Corrected a few formatting issues and still added parameters for the slow- and fast-exchange regime.

Formatting issues corrected were spotted by Ed in a post at:
https://mail.gna.org/public/relax-devel/2009-01/msg00045.html
(Message-id: <7f080ed10901091243k76e08449ld2d1a4d273b97f71@...>)
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Ported r8353 from the old relax_disp branch into the new branch.

The command used was:
svn merge -r8352:8353 svn+ssh://bugman@.../svn/relax/branches/relax_disp/specific_fns/@r18123 specific_analyses

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r8353 | semor | 2009-01-09 21:36:55 +0100 (Fri, 09 Jan 2009) | 3 lines
Changed paths:
M /branches/relax_disp/specific_fns/relax_disp.py

Corrected a few formatting issues and still added parameters for the slow- and fast-exchange regime.
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