| Commit | Date | |
|---|---|---|
| 
             
                
                [r18892]
                
                
                by 
        
  
    
   bugman
    
                 
          Fix for the Structure.test_load_scientific_results system test for the atom_loop() structural object changes.  | 
          2013-03-19 16:11:04 | Tree | 
| 
             
                
                [r18891]
                
                
                by 
        
  
    
   bugman
    
                 
          The index_flag argument to the ScientificPython structural object atom_loop() method is now used.  | 
          2013-03-19 16:09:28 | Tree | 
| 
             
                
                [r18890]
                
                
                by 
        
  
    
   bugman
    
                 
          Fix for the structure.write_pdb user function for the internal structural object. Helix and sheet PDB record creation is now skipped if no helices or sheets are defined.  | 
          2013-03-19 16:07:16 | Tree | 
| 
             
                
                [r18889]
                
                
                by 
        
  
    
   bugman
    
                 
          Lots of fixes for the change to the structural API atom_loop() method. This method when returning a single item now returns a single item rather than a tuple of length 1.  | 
          2013-03-19 16:04:24 | Tree | 
| 
             
                
                [r18888]
                
                
                by 
        
  
    
   bugman
    
                 
          Modified the ScientificPython structural object atom_loop() method to match the internal object. If only one element is returned from the atom_loop(), then this is returned as a single item rather  | 
          2013-03-19 16:02:52 | Tree | 
| 
             
                
                [r18887]
                
                
                by 
        
  
    
   bugman
    
                 
          Implemented the Internal._trim_sheet() internal structural object method. This is also now used by the structure.delete user function to remove sheet metadata for residues  | 
          2013-03-19 15:50:27 | Tree | 
| 
             
                
                [r18886]
                
                
                by 
        
  
    
   bugman
    
                 
          Created 13 unit tests of the Internal._trim_sheet() internal structural object method. These are mirror the 13 unit tests of Internal._trim_helix().  | 
          2013-03-19 15:45:03 | Tree | 
| 
             
                
                [r18885]
                
                
                by 
        
  
    
   bugman
    
                 
          Fixes for the helix metadata deletion for the internal structural object. This affects the structure.delete user function.  | 
          2013-03-19 15:24:02 | Tree | 
| 
             
                
                [r18884]
                
                
                by 
        
  
    
   bugman
    
                 
          Fix for the internal structural object _trim_helix() method for the helix metadata format.  | 
          2013-03-19 14:54:28 | Tree | 
| 
             
                
                [r18883]
                
                
                by 
        
  
    
   bugman
    
                 
          Modified all of the unit tests of the internal structural object _trim_helix() method. The structure of the helix metadata in the internal structural object was not correctly mimicked.  | 
          2013-03-19 14:53:52 | Tree |