relax SVN archive

Merged revisions 18822-18828 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

........
r18822 | bugman | 2013-03-13 18:24:47 +0100 (Wed, 13 Mar 2013) | 9 lines

Fix for a strange and extremely rare typo bug in the model-free specific analysis code.

This was identified by Manish Chaubey <manish dott chaubey att tuebingen dott mpg dott de> in the
message at http://thread.gmane.org/gmane.science.nmr.relax.user/1422.

This only occurs if a relaxation data error of zero is encountered and is a bug in the RelaxError
message explaining the problem with the data.
........
r18823 | bugman | 2013-03-14 17:54:01 +0100 (Thu, 14 Mar 2013) | 5 lines

Created the front end for the new structure.create_rotor_pdb user function.

This will be used to create a PDB representation of a rotor motional model.
........
r18824 | bugman | 2013-03-14 19:35:40 +0100 (Thu, 14 Mar 2013) | 3 lines

Added file, directory and overwrite force arguments to the structure.create_rotor_pdb user function.
........
r18825 | bugman | 2013-03-14 19:59:45 +0100 (Thu, 14 Mar 2013) | 3 lines

Started to implement the backend of the structure.create_rotor_pdb user function.
........
r18826 | bugman | 2013-03-15 10:32:04 +0100 (Fri, 15 Mar 2013) | 3 lines

The internal structural object MolContainer.add_atom() method now returns the index of the new atom.
........
r18827 | bugman | 2013-03-15 10:59:10 +0100 (Fri, 15 Mar 2013) | 3 lines

Created the internal structural object MolContainer.last_residue() method.
........
r18828 | bugman | 2013-03-15 11:21:12 +0100 (Fri, 15 Mar 2013) | 5 lines

Fully implemented the structure.create_rotor_pdb user function.

For this, the generic_fns.structure.geometric.create_rotor_propellers() function was created.
........

Fully implemented the structure.create_rotor_pdb user function.

For this, the generic_fns.structure.geometric.create_rotor_propellers() function was created.

Created the internal structural object MolContainer.last_residue() method.

The internal structural object MolContainer.add_atom() method now returns the index of the new atom.

Started to implement the backend of the structure.create_rotor_pdb user function.

Added file, directory and overwrite force arguments to the structure.create_rotor_pdb user function.

Created the front end for the new structure.create_rotor_pdb user function.

This will be used to create a PDB representation of a rotor motional model.

Fix for a strange and extremely rare typo bug in the model-free specific analysis code.

This was identified by Manish Chaubey <manish dott chaubey att tuebingen dott mpg dott de> in the
message at http://thread.gmane.org/gmane.science.nmr.relax.user/1422.

This only occurs if a relaxation data error of zero is encountered and is a bug in the RelaxError
message explaining the problem with the data.

Merged revisions 18819-18820 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

........
r18819 | bugman | 2013-03-13 16:18:17 +0100 (Wed, 13 Mar 2013) | 5 lines

Shifted all of the documentation variables to the top of the specific API_base class.

This is for better organisation.
........
r18820 | bugman | 2013-03-13 16:19:05 +0100 (Wed, 13 Mar 2013) | 5 lines

Added the write_doc class variable to the specific analysis API class as a empty string.

This is to fix the unit tests.
........

Added the write_doc class variable to the specific analysis API class as a empty string.

This is to fix the unit tests.