relax SVN archive

Fix for the generic_fns.structure.pdb_write.het() function - the record now has trailing whitespace.

The PDB records require trailing whitespace to the 80th character position.

Fix for the generic_fns.structure.pdb_write.helix() function.

The single character PDB record formatting should be %1s, not %s.

Created a unit test for the generic_fns.structure.pdb_write.het() function.

Docstring edits for the generic_fns.structure.pdb_* module unit tests.

Merged revisions 18531 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

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r18531 | bugman | 2013-02-20 15:47:45 +0100 (Wed, 20 Feb 2013) | 9 lines

Fix for bug #20531 (https://gna.org/bugs/?20531).

This is the bug of the RelaxFault during the final stages of the auto_analysis.dauvergne_protocol
model-free analysis when the Molmol and PyMOL macros are being created. The problem was caused by
model m9 (just the Rex parameter) when trying to determine what the order parameter for fast (< 200
ps) motions is. The code was assuming that the model-free model would always contain an order
parameter. It is very strange that this has only been rarely encountered!
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Fix for bug #20531 (https://gna.org/bugs/?20531).

This is the bug of the RelaxFault during the final stages of the auto_analysis.dauvergne_protocol
model-free analysis when the Molmol and PyMOL macros are being created. The problem was caused by
model m9 (just the Rex parameter) when trying to determine what the order parameter for fast (< 200
ps) motions is. The code was assuming that the model-free model would always contain an order
parameter. It is very strange that this has only been rarely encountered!

Merged revisions 18529 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

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r18529 | bugman | 2013-02-20 15:43:12 +0100 (Wed, 20 Feb 2013) | 3 lines

Implemented the PDB SHEET record writing function generic_fns.structure.pdb_write.sheet().
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Implemented the PDB SHEET record writing function generic_fns.structure.pdb_write.sheet().

Merged revisions 18527 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

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r18527 | bugman | 2013-02-20 15:37:20 +0100 (Wed, 20 Feb 2013) | 5 lines

The Mf.test_bug_20531_molmol_macro_write_relaxfault system test now catches bug #20531.

This now uses the results file attached to the bug report https://gna.org/bugs/?20531.
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The Mf.test_bug_20531_molmol_macro_write_relaxfault system test now catches bug #20531.

This now uses the results file attached to the bug report https://gna.org/bugs/?20531.