relax SVN archive

relax version 2.2.1.

This is a quick bugfix release solving a number of issues uncovered since the 2.2.0 release.

Another fix for the new Bmrb.test_bug_20471_structure_present system test.

Modified the bmrb.read documentation to make it clearer that the data pipe must be empty.

Fix for the Bmrb.test_bug_20471_structure_present system test.

The bmrb.read user function call should and does raise a RelaxError.

Merged revisions 18358-18360 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

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r18358 | bugman | 2013-02-01 16:53:34 +0100 (Fri, 01 Feb 2013) | 3 lines

Created the Bmrb.test_bug_20471_structure_present to catch bug #20471 (https://gna.org/bugs/?20471).
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r18359 | bugman | 2013-02-01 17:03:20 +0100 (Fri, 01 Feb 2013) | 7 lines

Fix for bug #20471 (https://gna.org/bugs/?20471).

The problem was that the data pipe is_empty() method was not handling structural data correctly.
The is_empty() method now belongs to the MolContainer objects rather than cdp.structure, and the
object cdp.structure is not always present.
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r18360 | bugman | 2013-02-01 17:04:27 +0100 (Fri, 01 Feb 2013) | 7 lines

Fix for bug #20471 (https://gna.org/bugs/?20471).

The problem was that the data pipe is_empty() method was not handling structural data correctly.
The is_empty() method now belongs to the MolContainer objects rather than cdp.structure, and the
object cdp.structure is not always present.
........

Fix for bug #20471 (https://gna.org/bugs/?20471).

The problem was that the data pipe is_empty() method was not handling structural data correctly.
The is_empty() method now belongs to the MolContainer objects rather than cdp.structure, and the
object cdp.structure is not always present.

Fix for bug #20471 (https://gna.org/bugs/?20471).

The problem was that the data pipe is_empty() method was not handling structural data correctly.
The is_empty() method now belongs to the MolContainer objects rather than cdp.structure, and the
object cdp.structure is not always present.

Created the Bmrb.test_bug_20471_structure_present to catch bug #20471 (https://gna.org/bugs/?20471).

Merged revisions 18355-18356 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

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r18355 | bugman | 2013-02-01 15:55:17 +0100 (Fri, 01 Feb 2013) | 3 lines

Removed a debugging print out.
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r18356 | bugman | 2013-02-01 15:59:02 +0100 (Fri, 01 Feb 2013) | 7 lines

Fix for the Mf.test_bug_20213_asn_sidechain system test.

The file test_suite/shared_data/model_free/bug_20213_asn_sidechain/1U06-H_trunc.pdb contains
alternate location indicators! Therefore the structure.read_pdb user function call requires the
alt_loc argument.
........

Fix for the Mf.test_bug_20213_asn_sidechain system test.

The file test_suite/shared_data/model_free/bug_20213_asn_sidechain/1U06-H_trunc.pdb contains
alternate location indicators! Therefore the structure.read_pdb user function call requires the
alt_loc argument.