relax / SVN archive Commit Log

Commit	Date
[r18354] by bugman Merged revisions 18350-18352 via svnmerge from svn+ssh://bugman@.../svn/relax/trunk ........ r18350 \| bugman \| 2013-02-01 15:23:45 +0100 (Fri, 01 Feb 2013) \| 6 lines Created the Structure.test_alt_loc_missing system test. This is to test that the internal relax PDB reader raises an error when a PDB file is encountered with alternate location indicators but the alt_loc argument has not been specified. ........ r18351 \| bugman \| 2013-02-01 15:27:36 +0100 (Fri, 01 Feb 2013) \| 7 lines Fix for bug #20470 (https://gna.org/bugs/?20470). The structure.read_pdb user function now accepts the alt_loc argument for specifying the alternate location indicator to read. This is used by the internal PDB reader. The bug was caught by the Structure.test_bug_20470_alternate_location_indicator system test. ........ r18352 \| bugman \| 2013-02-01 15:37:30 +0100 (Fri, 01 Feb 2013) \| 5 lines Fix for the checking of the alternate location indicator in the internal PDB reader. These checks now only occur for the ATOM and HETATM records. ........	2013-02-01 14:55:03	Tree
[r18353] by bugman Merged revisions 18349 via svnmerge from svn+ssh://bugman@.../svn/relax/trunk ........ r18349 \| bugman \| 2013-02-01 13:08:27 +0100 (Fri, 01 Feb 2013) \| 5 lines Created the Structure.test_bug_20470_alternate_location_indicator system test to catch bug #20470. This report is at https://gna.org/bugs/?20470. ........	2013-02-01 14:52:58	Tree
[r18352] by bugman Fix for the checking of the alternate location indicator in the internal PDB reader. These checks now only occur for the ATOM and HETATM records.	2013-02-01 14:37:30	Tree
[r18351] by bugman Fix for bug #20470 (https://gna.org/bugs/?20470). The structure.read_pdb user function now accepts the alt_loc argument for specifying the alternate location indicator to read. This is used by the internal PDB reader. The bug was caught by the Structure.test_bug_20470_alternate_location_indicator system test.	2013-02-01 14:27:36	Tree
[r18350] by bugman Created the Structure.test_alt_loc_missing system test. This is to test that the internal relax PDB reader raises an error when a PDB file is encountered with alternate location indicators but the alt_loc argument has not been specified.	2013-02-01 14:23:45	Tree
[r18349] by bugman Created the Structure.test_bug_20470_alternate_location_indicator system test to catch bug #20470. This report is at https://gna.org/bugs/?20470.	2013-02-01 12:08:27	Tree
[r18348] by bugman Merged revisions 18346 via svnmerge from svn+ssh://bugman@.../svn/relax/trunk ........ r18346 \| bugman \| 2013-02-01 12:42:22 +0100 (Fri, 01 Feb 2013) \| 3 lines Python 3 print statement fixes for the Geometry.Transformation ScientificPython module. ........	2013-02-01 12:04:37	Tree
[r18347] by bugman Merged revisions 18345 via svnmerge from svn+ssh://bugman@.../svn/relax/trunk ........ r18345 \| bugman \| 2013-02-01 12:39:47 +0100 (Fri, 01 Feb 2013) \| 17 lines Python 3 fixes for the newly included Geometry.Transformation ScientificPython module. The command used was: 2to3 -w \ -f buffer \ -f idioms \ -f set_literal \ -f ws_comma \ -x except \ -x import \ -x imports \ -x long \ -x numliterals \ -x xrange \ /data/relax/relax-trunk/extern/scientific_python/Geometry/Transformation.py ........	2013-02-01 11:42:40	Tree
[r18346] by bugman Python 3 print statement fixes for the Geometry.Transformation ScientificPython module.	2013-02-01 11:42:22	Tree
[r18345] by bugman Python 3 fixes for the newly included Geometry.Transformation ScientificPython module. The command used was: 2to3 -w \ -f buffer \ -f idioms \ -f set_literal \ -f ws_comma \ -x except \ -x import \ -x imports \ -x long \ -x numliterals \ -x xrange \ /data/relax/relax-trunk/extern/scientific_python/Geometry/Transformation.py	2013-02-01 11:39:47	Tree

[r18354] by bugman

Merged revisions 18350-18352 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

........
r18350 | bugman | 2013-02-01 15:23:45 +0100 (Fri, 01 Feb 2013) | 6 lines

Created the Structure.test_alt_loc_missing system test.

This is to test that the internal relax PDB reader raises an error when a PDB file is encountered
with alternate location indicators but the alt_loc argument has not been specified.
........
r18351 | bugman | 2013-02-01 15:27:36 +0100 (Fri, 01 Feb 2013) | 7 lines

Fix for bug #20470 (https://gna.org/bugs/?20470).

The structure.read_pdb user function now accepts the alt_loc argument for specifying the alternate
location indicator to read. This is used by the internal PDB reader. The bug was caught by the
Structure.test_bug_20470_alternate_location_indicator system test.
........
r18352 | bugman | 2013-02-01 15:37:30 +0100 (Fri, 01 Feb 2013) | 5 lines

Fix for the checking of the alternate location indicator in the internal PDB reader.

These checks now only occur for the ATOM and HETATM records.
........

2013-02-01 14:55:03

Tree

[r18353] by bugman

Merged revisions 18349 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

........
r18349 | bugman | 2013-02-01 13:08:27 +0100 (Fri, 01 Feb 2013) | 5 lines

Created the Structure.test_bug_20470_alternate_location_indicator system test to catch bug #20470.

This report is at https://gna.org/bugs/?20470.
........

2013-02-01 14:52:58

Tree

[r18352] by bugman

Fix for the checking of the alternate location indicator in the internal PDB reader.

These checks now only occur for the ATOM and HETATM records.

2013-02-01 14:37:30

Tree

[r18351] by bugman

Fix for bug #20470 (https://gna.org/bugs/?20470).

The structure.read_pdb user function now accepts the alt_loc argument for specifying the alternate
location indicator to read. This is used by the internal PDB reader. The bug was caught by the
Structure.test_bug_20470_alternate_location_indicator system test.

2013-02-01 14:27:36

Tree

[r18350] by bugman

Created the Structure.test_alt_loc_missing system test.

This is to test that the internal relax PDB reader raises an error when a PDB file is encountered
with alternate location indicators but the alt_loc argument has not been specified.

2013-02-01 14:23:45

Tree

[r18349] by bugman

Created the Structure.test_bug_20470_alternate_location_indicator system test to catch bug #20470.

This report is at https://gna.org/bugs/?20470.

2013-02-01 12:08:27

Tree

[r18348] by bugman

Merged revisions 18346 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

........
r18346 | bugman | 2013-02-01 12:42:22 +0100 (Fri, 01 Feb 2013) | 3 lines

Python 3 print statement fixes for the Geometry.Transformation ScientificPython module.
........

2013-02-01 12:04:37

Tree

[r18347] by bugman

Merged revisions 18345 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

........
r18345 | bugman | 2013-02-01 12:39:47 +0100 (Fri, 01 Feb 2013) | 17 lines

Python 3 fixes for the newly included Geometry.Transformation ScientificPython module.

The command used was:
2to3 -w \
-f buffer \
-f idioms \
-f set_literal \
-f ws_comma \
-x except \
-x import \
-x imports \
-x long \
-x numliterals \
-x xrange \
/data/relax/relax-trunk/extern/scientific_python/Geometry/Transformation.py
........

2013-02-01 11:42:40

Tree

[r18346] by bugman

Python 3 print statement fixes for the Geometry.Transformation ScientificPython module.

2013-02-01 11:42:22

Tree

[r18345] by bugman

Python 3 fixes for the newly included Geometry.Transformation ScientificPython module.

The command used was:
2to3 -w \
-f buffer \
-f idioms \
-f set_literal \
-f ws_comma \
-x except \
-x import \
-x imports \
-x long \
-x numliterals \
-x xrange \
/data/relax/relax-trunk/extern/scientific_python/Geometry/Transformation.py

2013-02-01 11:39:47

Tree

relax SVN archive

Molecular dynamics by NMR data analysis

SVN archive Commit Log