Menu

Commit [r18354]  Maximize  Restore  History

Merged revisions 18350-18352 via svnmerge from

svn+ssh://bugman@.../svn/relax/trunk

........
r18350 | bugman | 2013-02-01 15:23:45 +0100 (Fri, 01 Feb 2013) | 6 lines

Created the Structure.test_alt_loc_missing system test.

This is to test that the internal relax PDB reader raises an error when a PDB file is encountered
with alternate location indicators but the alt_loc argument has not been specified.
........
r18351 | bugman | 2013-02-01 15:27:36 +0100 (Fri, 01 Feb 2013) | 7 lines

Fix for bug #20470 (https://gna.org/bugs/?20470).

The structure.read_pdb user function now accepts the alt_loc argument for specifying the alternate
location indicator to read. This is used by the internal PDB reader. The bug was caught by the
Structure.test_bug_20470_alternate_location_indicator system test.
........
r18352 | bugman | 2013-02-01 15:37:30 +0100 (Fri, 01 Feb 2013) | 5 lines

Fix for the checking of the alternate location indicator in the internal PDB reader.

These checks now only occur for the ATOM and HETATM records.
........

bugman 2013-02-01

changed /branches/frame_order_testing
changed /branches/frame_order_testing/generic_fns/structure/api_base.py
changed /branches/frame_order_testing/generic_fns/structure/internal.py
changed /branches/frame_order_testing/generic_fns/structure/main.py
changed /branches/frame_order_testing/generic_fns/structure/scientific.py
changed /branches/frame_order_testing/test_suite/system_tests/structure.py
changed /branches/frame_order_testing/user_functions/structure.py
/branches/frame_order_testing/generic_fns/structure/api_base.py Diff Switch to side-by-side view
Loading...
/branches/frame_order_testing/generic_fns/structure/internal.py Diff Switch to side-by-side view
Loading...
/branches/frame_order_testing/generic_fns/structure/main.py Diff Switch to side-by-side view
Loading...
/branches/frame_order_testing/generic_fns/structure/scientific.py Diff Switch to side-by-side view
Loading...
/branches/frame_order_testing/test_suite/system_tests/structure.py Diff Switch to side-by-side view
Loading...
/branches/frame_order_testing/user_functions/structure.py Diff Switch to side-by-side view
Loading...
Want the latest updates on software, tech news, and AI?
Get latest updates about software, tech news, and AI from SourceForge directly in your inbox once a month.