relax SVN archive

Created the Structure.test_bug_20470_alternate_location_indicator system test to catch bug #20470.

This report is at https://gna.org/bugs/?20470.

Merged revisions 18346 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

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r18346 | bugman | 2013-02-01 12:42:22 +0100 (Fri, 01 Feb 2013) | 3 lines

Python 3 print statement fixes for the Geometry.Transformation ScientificPython module.
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Merged revisions 18345 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

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r18345 | bugman | 2013-02-01 12:39:47 +0100 (Fri, 01 Feb 2013) | 17 lines

Python 3 fixes for the newly included Geometry.Transformation ScientificPython module.

The command used was:
2to3 -w \
-f buffer \
-f idioms \
-f set_literal \
-f ws_comma \
-x except \
-x import \
-x imports \
-x long \
-x numliterals \
-x xrange \
/data/relax/relax-trunk/extern/scientific_python/Geometry/Transformation.py
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Python 3 print statement fixes for the Geometry.Transformation ScientificPython module.

Python 3 fixes for the newly included Geometry.Transformation ScientificPython module.

The command used was:
2to3 -w \
-f buffer \
-f idioms \
-f set_literal \
-f ws_comma \
-x except \
-x import \
-x imports \
-x long \
-x numliterals \
-x xrange \
/data/relax/relax-trunk/extern/scientific_python/Geometry/Transformation.py

Merged revisions 18343 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

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r18343 | bugman | 2013-02-01 12:37:16 +0100 (Fri, 01 Feb 2013) | 7 lines

Fix for bug #20469 (https://gna.org/bugs/?20469).

This is the Failure in reading X-ray PDB files using the ScientificPython parser. The
ScientificPython Geometry.Transformation module is now distributed with relax. Some linear algebra
imports in the Geometry.TensorModule in newly used code paths have been fixed as well.
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Fix for bug #20469 (https://gna.org/bugs/?20469).

This is the Failure in reading X-ray PDB files using the ScientificPython parser. The
ScientificPython Geometry.Transformation module is now distributed with relax. Some linear algebra
imports in the Geometry.TensorModule in newly used code paths have been fixed as well.

Merged revisions 18341 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

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r18341 | bugman | 2013-02-01 11:56:06 +0100 (Fri, 01 Feb 2013) | 5 lines

Created the Structure.test_bug_20469_scientific_parser_xray_records system test.

This is to catch bug #20469 (https://gna.org/bugs/?20469).
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Created the Structure.test_bug_20469_scientific_parser_xray_records system test.

This is to catch bug #20469 (https://gna.org/bugs/?20469).

Merged revisions 18338-18339 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

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r18338 | bugman | 2013-02-01 11:48:46 +0100 (Fri, 01 Feb 2013) | 5 lines

Fix for the bug reported as the support request #2998 (https://gna.org/support/?2998).

CONECT records pointing to non-existent atoms can now be handled.
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r18339 | bugman | 2013-02-01 11:49:53 +0100 (Fri, 01 Feb 2013) | 3 lines

Copyright update.
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