relax SVN archive

Python 3 fix for the new pcs.structural_noise user function.

There was a string/unicode problem in the Grace plot creation code.

The Pipes.test_change_type system test is skipped if the required scipy module is not installed.

Fix for the rdc.set_errors user function for the frame order testing branch changes.

Fix for the pcs.set_errors user function for the frame order testing branch changes.

Merged revisions 18209-18220 via svnmerge from
svn+ssh://bugman@.../svn/relax/trunk

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r18209 | bugman | 2013-01-17 18:39:56 +0100 (Thu, 17 Jan 2013) | 6 lines

The N-state model grid search optimises each tensor separately when only tensors are optimised.

This massively collapses the grid search size from inc**(5*N) to N*inc**5, where inc are the number
of increments per dimension and N is the number of alignments, making a grid search possible.
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r18210 | bugman | 2013-01-18 10:42:26 +0100 (Fri, 18 Jan 2013) | 5 lines

Created the N_state_model.test_mc_sim_failure system test to demonstrate a bug in the N-state model.

This appears to be a problem with Monte Carlo simulations when data is missing.
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r18211 | bugman | 2013-01-18 10:46:36 +0100 (Fri, 18 Jan 2013) | 6 lines

Fix for the bug caught by the N_state_model.test_mc_sim_failure system test.

If no RDC error is present, then the returned error from the N-state model analysis specific method
return_error() is None.
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r18212 | bugman | 2013-01-18 11:05:38 +0100 (Fri, 18 Jan 2013) | 5 lines

Modified the N_state_model.test_mc_sim_failure system test to include missing PCS data.

This is to catch another bug.
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r18213 | bugman | 2013-01-18 11:07:40 +0100 (Fri, 18 Jan 2013) | 5 lines

Fix for the missing PCS data in the N-state model Monte Carlo simulations.

This was caught by the N_state_model.test_mc_sim_failure system test.
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r18214 | bugman | 2013-01-18 11:41:50 +0100 (Fri, 18 Jan 2013) | 5 lines

Modified the missing data system test script to include Monte Carlo simulations.

This is to cover untested code paths.
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r18215 | bugman | 2013-01-18 11:51:40 +0100 (Fri, 18 Jan 2013) | 5 lines

Added calls to rdc.set_errors and pcs.set_errors in the missing data N-state model system test script.

These user functions currently do not exist, but are needed as the data files contain no errors.
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r18216 | bugman | 2013-01-18 12:14:17 +0100 (Fri, 18 Jan 2013) | 3 lines

Implemented the rdc.set_errors user function.
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r18217 | bugman | 2013-01-18 12:21:25 +0100 (Fri, 18 Jan 2013) | 3 lines

Implemented the pcs.set_error user function.
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r18218 | bugman | 2013-01-18 12:23:34 +0100 (Fri, 18 Jan 2013) | 3 lines

Removed a debugging commenting out in the pcs.set_errors user function definition.
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r18219 | bugman | 2013-01-18 12:43:24 +0100 (Fri, 18 Jan 2013) | 3 lines

Fix for the N_state_model.test_mc_sim_failure GUI test - the relax data store was not empty at the start.
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r18220 | bugman | 2013-01-18 12:46:24 +0100 (Fri, 18 Jan 2013) | 7 lines

Modified all generic_fns.mol_res_spin.get_*() functions to handle no data pipes being present.

These functions were previously raising RelaxErrors as no pipes were present. They now return empty
lists instead. This allows many of the GUI user functions to open in the GUI when no data is
present, allowing better debugging and less confusion for the user.
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Modified all generic_fns.mol_res_spin.get_*() functions to handle no data pipes being present.

These functions were previously raising RelaxErrors as no pipes were present. They now return empty
lists instead. This allows many of the GUI user functions to open in the GUI when no data is
present, allowing better debugging and less confusion for the user.

Fix for the N_state_model.test_mc_sim_failure GUI test - the relax data store was not empty at the start.

Removed a debugging commenting out in the pcs.set_errors user function definition.

Implemented the pcs.set_error user function.

Implemented the rdc.set_errors user function.