relax SVN archive

Created a special method for setting up the RDC, PCS, and optimisation flags.

The data and optimisation flags are now setup in the setUp() method.

Triplicated the free rotor frame order model system tests.

The additional system tests check the models with either no RDC data or no PCS data.

Reactivated the Frame_order.test_cam_free_rotor2 system test using the new analysis design.

The frame order specific analysis is now using the _set_param_values() common rather than spin method.

Created the specific API _set_param_values() common method.

This is for when there are both global and spin parameters.

The frame order global parameters are now set via the value.set user function.

Merged revisions 15254-15258 via svnmerge from
svn+ssh://bugman@.../svn/relax/1.3

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r15254 | bugman | 2012-01-26 08:48:20 +0100 (Thu, 26 Jan 2012) | 5 lines

Bug fix for the consistency testing analysis for when relaxation data of None is encountered.

This matches the changes of r15247 for the J(w) mapping analysis.
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r15255 | bugman | 2012-01-26 10:32:55 +0100 (Thu, 26 Jan 2012) | 8 lines

Big bugfix for the value.read user function.

This is for bug #19332 (https://gna.org/bugs/?19332).

The problem was that the wrong spin ID string was being used to set the parameter value so that
all spins have the same value set for the parameter.
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r15256 | bugman | 2012-01-26 10:43:07 +0100 (Thu, 26 Jan 2012) | 6 lines

Fixes for the Dasha use functions for file creation and data extraction.

This should now handle relaxation data values of None, and also set the parameter values of
deselected spins using the Dasha output files.
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r15257 | bugman | 2012-01-26 10:44:26 +0100 (Thu, 26 Jan 2012) | 5 lines

Fixes for the Dasha system test for the bug #19332 fix (https://gna.org/bugs/?19332).

The parameter values should be different for each spin! And the chi2 value is spin specific.
........
r15258 | bugman | 2012-01-26 11:24:42 +0100 (Thu, 26 Jan 2012) | 6 lines

Bug fix for the model-free analysis for when relaxation data of None is encountered.

This matches the changes of r15247 for the J(w) mapping analysis. This bug would rarely be
encountered.
........

Merged revisions 15254-15258 via svnmerge from
svn+ssh://bugman@.../svn/relax/1.3

........
r15254 | bugman | 2012-01-26 08:48:20 +0100 (Thu, 26 Jan 2012) | 5 lines

Bug fix for the consistency testing analysis for when relaxation data of None is encountered.

This matches the changes of r15247 for the J(w) mapping analysis.
........
r15255 | bugman | 2012-01-26 10:32:55 +0100 (Thu, 26 Jan 2012) | 8 lines

Big bugfix for the value.read user function.

This is for bug #19332 (https://gna.org/bugs/?19332).

The problem was that the wrong spin ID string was being used to set the parameter value so that
all spins have the same value set for the parameter.
........
r15256 | bugman | 2012-01-26 10:43:07 +0100 (Thu, 26 Jan 2012) | 6 lines

Fixes for the Dasha use functions for file creation and data extraction.

This should now handle relaxation data values of None, and also set the parameter values of
deselected spins using the Dasha output files.
........
r15257 | bugman | 2012-01-26 10:44:26 +0100 (Thu, 26 Jan 2012) | 5 lines

Fixes for the Dasha system test for the bug #19332 fix (https://gna.org/bugs/?19332).

The parameter values should be different for each spin! And the chi2 value is spin specific.
........
r15258 | bugman | 2012-01-26 11:24:42 +0100 (Thu, 26 Jan 2012) | 6 lines

Bug fix for the model-free analysis for when relaxation data of None is encountered.

This matches the changes of r15247 for the J(w) mapping analysis. This bug would rarely be
encountered.
........

Merged revisions 15245-15249,15254-15258 via svnmerge from
svn+ssh://bugman@.../svn/relax/1.3

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r15245 | bugman | 2012-01-25 14:24:25 +0100 (Wed, 25 Jan 2012) | 3 lines

Indentation fix.
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r15246 | bugman | 2012-01-25 14:32:40 +0100 (Wed, 25 Jan 2012) | 5 lines

Modified the J(w) mapping test data to include relaxation values of None.

This should trigger bug #19329 (https://gna.org/bugs/index.php?19329) in the test suite.
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r15247 | bugman | 2012-01-25 14:39:13 +0100 (Wed, 25 Jan 2012) | 6 lines

Fix for bug #19329 (https://gna.org/bugs/index.php?19329).

The spin is now deselected if there is really less than three data points, excluding data points of
None.
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r15248 | bugman | 2012-01-25 14:43:54 +0100 (Wed, 25 Jan 2012) | 3 lines

Added some value.write user functions to the J(w) mapping sample script.
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r15249 | bugman | 2012-01-25 14:50:54 +0100 (Wed, 25 Jan 2012) | 3 lines

Added value.write uf calls to the J(w) mapping system test script.
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r15254 | bugman | 2012-01-26 08:48:20 +0100 (Thu, 26 Jan 2012) | 5 lines

Bug fix for the consistency testing analysis for when relaxation data of None is encountered.

This matches the changes of r15247 for the J(w) mapping analysis.
........
r15255 | bugman | 2012-01-26 10:32:55 +0100 (Thu, 26 Jan 2012) | 8 lines

Big bugfix for the value.read user function.

This is for bug #19332 (https://gna.org/bugs/?19332).

The problem was that the wrong spin ID string was being used to set the parameter value so that
all spins have the same value set for the parameter.
........
r15256 | bugman | 2012-01-26 10:43:07 +0100 (Thu, 26 Jan 2012) | 6 lines

Fixes for the Dasha use functions for file creation and data extraction.

This should now handle relaxation data values of None, and also set the parameter values of
deselected spins using the Dasha output files.
........
r15257 | bugman | 2012-01-26 10:44:26 +0100 (Thu, 26 Jan 2012) | 5 lines

Fixes for the Dasha system test for the bug #19332 fix (https://gna.org/bugs/?19332).

The parameter values should be different for each spin! And the chi2 value is spin specific.
........
r15258 | bugman | 2012-01-26 11:24:42 +0100 (Thu, 26 Jan 2012) | 6 lines

Bug fix for the model-free analysis for when relaxation data of None is encountered.

This matches the changes of r15247 for the J(w) mapping analysis. This bug would rarely be
encountered.
........