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Commit Date  
[r14850] by bugman

Added some optimisation speed ups to the metal_pos_opt.py N-state model system test script.

These are to allow the test to complete in a reasonable time.

2011-10-12 15:50:04 Tree
[r14849] by bugman

Yet another fix for the N-state model target functions.

The Ln3+ optimisation with the tensors fixed was resulting in a chi2 value of 0 at all times!

2011-10-12 15:40:47 Tree
[r14848] by bugman

Added another check to the metal optimisation N-state model system test script.

This now catches if the metal has been optimised when the tensors are fixed.

2011-10-12 15:36:19 Tree
[r14847] by bugman

One last fix for the setup of the N-state model target functions.

2011-10-12 15:28:48 Tree
[r14846] by bugman

Fixes for all of the N-state models - the indices were not being incremented!

2011-10-12 15:19:36 Tree
[r14845] by bugman

Fix for the setup of the 2-domain N-state model.

2011-10-12 15:00:24 Tree
[r14844] by bugman

Fixes for the population N-state model target function.

2011-10-12 14:55:39 Tree
[r14843] by bugman

Fixes for the population N-state model for when subsets of alignment tensors are fixed.

This is in the function, gradient, and Hessian code.

2011-10-12 14:47:53 Tree
[r14842] by bugman

Updated the metal_pos_opt.py N-state model system test script to catch another code design problem.

2011-10-12 14:40:56 Tree
[r14841] by bugman

Removed an empty line.

2011-10-12 14:30:24 Tree
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