relax SVN archive

Fix for the PCS back-calculation function - divide by zero is now avoided.

The PCS back-calculation function was calculating the normalised bond vector between the lanthanide
atom and itself. The normalisation in this case is now avoided.

The Spectrum_list GUI element delete() method has been implemented.

This is used to clear up the status observer objects.

Removed on last reference to __check_args() in the spectrum.read_intensities uf back end.

This corresponds to the deletion of the function in r13647.

The analysis specific GUI methods registered as observers in the status object are now removed on reset.

This is a much better solution than resetting the entire status object.

A reset of relax now is signaled through the reset observer in the status object.

Reverted both r13693 and r13658, as this resetting of the status object was a very bad idea!!!

The commands used were:
svn merge -r13693:13692 .
svn merge -r13658:13657 .

This resetting was killing relax's execution state when scripting!

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r13693 | bugman | 2011-07-18 15:14:26 +0200 (Mon, 18 Jul 2011) | 3 lines
Changed paths:
M /branches/gui_testing/generic_fns/reset.py

Fix for the reset() function while in GUI mode - the status.show_gui flag is preserved.
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r13658 | bugman | 2011-07-15 18:55:01 +0200 (Fri, 15 Jul 2011) | 3 lines
Changed paths:
M /branches/gui_testing/generic_fns/reset.py

The reset method now reinitialises the relax status object.
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Better support in DummyFileObject for the presence or absence of a trailing \n character.

This adds on the changes of r13252:

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r13252 | bugman | 2011-06-28 10:59:52 +0200 (Tue, 28 Jun 2011) | 3 lines
Changed paths:
M /branches/gui_testing/relax_io.py

Bug fix for the DummyFileObject class - the last line was not returned by readlines() even if it had data.
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The NOE_calc auto-analysis now only has a few args passed into it.

The auto-analyses will be redesigned to take a fully loaded data pipe as input.

Removed most of the code from assemble_data() - the auto NOE analysis is now completely different.

Fix for the auto NOE analysis GUI test - the reference and saturated spectra were being mixed up.