relax SVN archive

Fix for the new test_curve_fitting_volume() system test - the intensity type is volume, not height!

The peak volume errors are now calculated for replicated spectra in the relaxation curve-fitting.

This bug was identified by Maddy Strickland <M.Strickland att bristol dott ac dot uk> in the post
Message-id: <55870.137.222.43.71.1294412799.squirrel@...>
https://mail.gna.org/public/relax-users/2011-01/msg00007.html.

Implemented a system test to catch a bug in the use of volumes for relaxation curve-fitting.

This bug was identified by Maddy Strickland <M.Strickland att bristol dott ac dot uk> in the post
Message-id: <55870.137.222.43.71.1294412799.squirrel@...>
https://mail.gna.org/public/relax-users/2011-01/msg00007.html.

The diffusion tensor spheroid_type variable is now only updated if it is never explicitly set.

This is to fix the diffusion tensor setting bug found by Vitaly Vostri <vvostri att gmail dott com>
(Message-id: <AANLkTinRO3ZCNwL6GeqWdx0uBvv=PQ=zw6vpdQQeruBW@...>
https://mail.gna.org/public/relax-users/2010-12/msg00014.html).

The result of this bug is that initialising a prolate diffusion tensor with Da set to zero caused
the spheroid_type to be automatically set to 'oblate'. This bug was introduced at exactly r11678,
and was part of changes for better BMRB support. This affects relax version 1.3.6 and the 1.3
repository line from r11678 to 12174.

The type of spheroid is now being checked in all of the oblate and prolate system tests.

Added a new system test for the prolate diffusion tensor, this time checking the diffusion type.

A spherical tensor is sent in, triggering the bug found by Vitaly Vostri <vvostri att gmail dott
com> (Message-id: <AANLkTinRO3ZCNwL6GeqWdx0uBvv=PQ=zw6vpdQQeruBW@...>
https://mail.gna.org/public/relax-users/2010-12/msg00014.html).

The problem is that the prolate tensor is changed to an oblate one!?!

Added the spin.copy user function window and menu entry.

Fix for the _get_spin_info() and _get_res_info() methods - they now return None, None if not found.

The _get_spin_id() and _get_spin_info() methods can now handle suffixes for the spin names.

This allows self.spin, self.spin_from, etc. to be used.

Added the file sample_scripts/full_analysis.py with a single line pointing to dauvergne_protocol.py.