relax SVN archive

svn+ssh://michaelbieri@.../svn/relax/1.3

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r11291 | bugman | 2010-07-08 19:45:21 +1000 (Thu, 08 Jul 2010) | 3 lines

Docstring improvements - the geometric info should be in Angstroms.
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r11292 | bugman | 2010-07-08 19:49:35 +1000 (Thu, 08 Jul 2010) | 9 lines

Better support for the optimisation and mapping of the Ln3+ position.

The position is now treated in Angstrom, and is properly scaled. A few additional API methods have
been added for the mapping of the optimisation space, and a few modified to support the Ln3+
position.
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r11293 | bugman | 2010-07-08 19:56:42 +1000 (Thu, 08 Jul 2010) | 3 lines

Fix for the Ln3+ position optimisation with no populations, the target function was overwritten.
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r11294 | bugman | 2010-07-08 21:03:13 +1000 (Thu, 08 Jul 2010) | 5 lines

Fix for the N-state model _assemble_scaling_matrix() method for the 2-domain model.

This is a recently introduced bug. For the 2-domain model, no alignment parameters are optimised.
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r11295 | bugman | 2010-07-08 21:49:04 +1000 (Thu, 08 Jul 2010) | 3 lines

Changed the alignment tensor parameter scaling back to 1 as this was slowing down the optimisation.
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r11296 | bugman | 2010-07-08 23:26:24 +1000 (Thu, 08 Jul 2010) | 3 lines

Created the n_state_model.elim_no_prob() to remove structures with zero probability.
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